RNA–Protein interactions for RNA: YGL070C

RPB9, Transcript of RNA polymerase II subunit B12.6, yeastyeast

Gene RPB9, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB9YGL070C POP7P38291 140 aa2.31□□□□□ -2.04
RPB9YGL070C YGP1P38616 354 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C GLE2P40066 365 aa2.31□□□□□ -2.04
RPB9YGL070C MRPL49P40858 161 aaPredicted RBP2.31□□□□□ -2.04
RPB9YGL070C PGU1P47180 361 aa2.31□□□□□ -2.04
RPB9YGL070C YGR050CP53231 118 aa2.31□□□□□ -2.04
RPB9YGL070C COS6P53344 381 aa2.31□□□□□ -2.04
RPB9YGL070C HAL1Q01766 294 aa2.31□□□□□ -2.04
RPB9YGL070C AIM34Q03673 198 aa2.31□□□□□ -2.04
RPB9YGL070C SPC2Q04969 178 aa2.31□□□□□ -2.04
RPB9YGL070C BRX1Q08235 291 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C NIP7Q08962 181 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C PRR2Q12310 699 aa2.31□□□□□ -2.04
RPB9YGL070C RDI1Q12434 202 aa2.31□□□□□ -2.04
RPB9YGL070C YPL247CQ12523 523 aa2.31□□□□□ -2.04
RPB9YGL070C DDP1Q99321 188 aaKnown RBP2.31□□□□□ -2.04
RPB9YGL070C YHR139C-AO13536 103 aa2.3□□□□□ -2.04
RPB9YGL070C ATG22P25568 528 aa2.3□□□□□ -2.04
RPB9YGL070C AHC2P25649 128 aa2.3□□□□□ -2.04
RPB9YGL070C CLG1P35190 452 aa2.3□□□□□ -2.04
RPB9YGL070C NVJ1P38881 321 aa2.3□□□□□ -2.04
RPB9YGL070C YAR068WP39564 161 aa2.3□□□□□ -2.04
RPB9YGL070C UBC12P52491 188 aa2.3□□□□□ -2.04
RPB9YGL070C MIG2P53035 382 aa2.3□□□□□ -2.04
RPB9YGL070C MDM34P53083 459 aa2.3□□□□□ -2.04
RPB9YGL070C ALG9P53868 555 aaKnown RBP2.3□□□□□ -2.04
RPB9YGL070C YNL010WP53981 241 aaKnown RBP2.3□□□□□ -2.04
RPB9YGL070C SMD1Q02260 146 aaPredicted RBP2.3□□□□□ -2.04
RPB9YGL070C YDR476CQ03362 224 aa2.3□□□□□ -2.04
RPB9YGL070C HPT1Q04178 221 aaKnown RBP2.3□□□□□ -2.04
RPB9YGL070C SHH4Q06236 168 aa2.3□□□□□ -2.04
RPB9YGL070C YLR031WQ07978 186 aa2.3□□□□□ -2.04
RPB9YGL070C BBP1Q12365 385 aa2.3□□□□□ -2.04
RPB9YGL070C GEP5Q12393 293 aa2.3□□□□□ -2.04
RPB9YGL070C PET20Q99373 253 aa2.3□□□□□ -2.04
RPB9YGL070C MBF1O14467 151 aaKnown RBP2.29□□□□□ -2.04
RPB9YGL070C ADH1P00330 348 aaKnown RBP2.29□□□□□ -2.04
RPB9YGL070C YPR170W-BP0C5R9 85 aa2.29□□□□□ -2.04
RPB9YGL070C SCO1P23833 295 aa2.29□□□□□ -2.04
RPB9YGL070C CNB1P25296 175 aa2.29□□□□□ -2.04
RPB9YGL070C POP4P38336 279 aa2.29□□□□□ -2.04
RPB9YGL070C AIM2P39721 246 aa2.29□□□□□ -2.04
RPB9YGL070C IRC22P40006 225 aa2.29□□□□□ -2.04
RPB9YGL070C NQM1P53228 333 aaPredicted RBP2.29□□□□□ -2.04
RPB9YGL070C TMA20P89886 181 aaPredicted RBP2.29□□□□□ -2.04
RPB9YGL070C GAS3Q03655 524 aa2.29□□□□□ -2.04
RPB9YGL070C DYN3Q04949 312 aa2.29□□□□□ -2.04
RPB9YGL070C ATG39Q06159 398 aa2.29□□□□□ -2.04
RPB9YGL070C TMC1Q08422 150 aaPredicted RBP2.29□□□□□ -2.04
RPB9YGL070C MHT1Q12525 324 aa2.29□□□□□ -2.04
RPB9YGL070C YPR014CQ6B0W2 109 aa2.29□□□□□ -2.04
RPB9YGL070C MDM35O60200 86 aa2.28□□□□□ -2.04
RPB9YGL070C RPL22AP05749 121 aaKnown RBP2.28□□□□□ -2.04
RPB9YGL070C PCL1P24867 279 aa2.28□□□□□ -2.04
RPB9YGL070C BUB2P26448 306 aaPredicted RBP2.28□□□□□ -2.04
RPB9YGL070C MRPS9P38120 278 aa2.28□□□□□ -2.04
RPB9YGL070C PFS2P42841 465 aaKnown RBP2.28□□□□□ -2.04
RPB9YGL070C ECO1P43605 281 aa2.28□□□□□ -2.04
RPB9YGL070C YFR045WP43617 309 aa2.28□□□□□ -2.04
RPB9YGL070C RPA43P46669 326 aa2.28□□□□□ -2.04
RPB9YGL070C OST2P46964 130 aa2.28□□□□□ -2.04
RPB9YGL070C YPL162CQ12042 273 aa2.28□□□□□ -2.04
RPB9YGL070C Q0297Q9ZZV8 51 aa2.28□□□□□ -2.04
RPB9YGL070C PET54P10834 293 aa2.27□□□□□ -2.05
RPB9YGL070C URA5P13298 226 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C CKS1P20486 150 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C BET1P22804 142 aa2.27□□□□□ -2.05
RPB9YGL070C TOM40P23644 387 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C STP22P25604 385 aa2.27□□□□□ -2.05
RPB9YGL070C YCR090CP25654 182 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C ARO7P32178 256 aa2.27□□□□□ -2.05
RPB9YGL070C PRE5P40302 234 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C ARC15P40518 154 aaRIP-Chip data2.27□□□□□ -2.05not detected
RPB9YGL070C MOG1P47123 218 aa2.27□□□□□ -2.05
RPB9YGL070C HST4P53688 370 aa2.27□□□□□ -2.05
RPB9YGL070C MIX14Q04341 121 aa2.27□□□□□ -2.05
RPB9YGL070C HNT1Q04344 158 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C GTT2Q12390 233 aa2.27□□□□□ -2.05
RPB9YGL070C MPD1Q12404 318 aaKnown RBP2.27□□□□□ -2.05
RPB9YGL070C YFR032C-BQ8TGU2 87 aa2.27□□□□□ -2.05
RPB9YGL070C SGA1P08019 549 aa2.26□□□□□ -2.05
RPB9YGL070C PBI2P0CT04 75 aaKnown RBP2.26□□□□□ -2.05
RPB9YGL070C SUI1P32911 108 aaKnown RBP2.26□□□□□ -2.05
RPB9YGL070C YKL102CP34249 101 aa2.26□□□□□ -2.05
RPB9YGL070C ICE2P40499 491 aa2.26□□□□□ -2.05
RPB9YGL070C YIR035CP40579 254 aa2.26□□□□□ -2.05
RPB9YGL070C ARP3P47117 449 aaKnown RBP2.26□□□□□ -2.05
RPB9YGL070C ARO8P53090 500 aaKnown RBP2.26□□□□□ -2.05
RPB9YGL070C YGR026WP53217 278 aa2.26□□□□□ -2.05
RPB9YGL070C PGA1P53896 198 aa2.26□□□□□ -2.05
RPB9YGL070C YDC1Q02896 317 aa2.26□□□□□ -2.05
RPB9YGL070C GPI17Q04080 534 aa2.26□□□□□ -2.05
RPB9YGL070C DGA1Q08650 418 aa2.26□□□□□ -2.05
RPB9YGL070C YPR063CQ12160 140 aa2.26□□□□□ -2.05
RPB9YGL070C FLO9P39712 1322 aa2.25□□□□□ -2.05
RPB9YGL070C YLR156WP0CE96 114 aa2.25□□□□□ -2.05
RPB9YGL070C YLR159WP0CE97 114 aa2.25□□□□□ -2.05
RPB9YGL070C YLR161WP0CE98 114 aa2.25□□□□□ -2.05
RPB9YGL070C RPB3P16370 318 aaKnown RBP2.25□□□□□ -2.05
RPB9YGL070C MDH3P32419 343 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms