RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W YMR31P19955 123 aa5.62□□□□□ -1.51
RGD2YFL047W DER1P38307 211 aa5.62□□□□□ -1.51
RGD2YFL047W YHR138CP38841 114 aaPredicted RBP5.62□□□□□ -1.51
RGD2YFL047W GPI2P46961 280 aa5.62□□□□□ -1.51
RGD2YFL047W GON7P46984 123 aa5.62□□□□□ -1.51
RGD2YFL047W NAT3Q06504 195 aa5.62□□□□□ -1.51
RGD2YFL047W YPS3Q12303 508 aa5.62□□□□□ -1.51
RGD2YFL047W RNH203Q12338 110 aa5.62□□□□□ -1.51
RGD2YFL047W YPR071WQ12346 211 aa5.62□□□□□ -1.51
RGD2YFL047W VPS63O13549 108 aa5.61□□□□□ -1.51
RGD2YFL047W POR1P04840 283 aaKnown RBP5.61□□□□□ -1.51
RGD2YFL047W TRP4P07285 380 aaPredicted RBP5.61□□□□□ -1.51
RGD2YFL047W MRS3P10566 314 aa5.61□□□□□ -1.51
RGD2YFL047W YGL010WP25338 174 aa5.61□□□□□ -1.51
RGD2YFL047W YJR015WP47090 510 aa5.61□□□□□ -1.51
RGD2YFL047W AIM24P47127 394 aa5.61□□□□□ -1.51
RGD2YFL047W BOR1P53838 576 aa5.61□□□□□ -1.51
RGD2YFL047W APS2Q00381 147 aa5.61□□□□□ -1.51
RGD2YFL047W LOA1Q06508 300 aa5.61□□□□□ -1.51
RGD2YFL047W UME6P39001 836 aa5.6□□□□□ -1.51
RGD2YFL047W PIC2P40035 300 aa5.6□□□□□ -1.51
RGD2YFL047W DSK2P48510 373 aa5.6□□□□□ -1.51
RGD2YFL047W SIP18P50263 79 aa5.6□□□□□ -1.51
RGD2YFL047W SHH3Q04487 196 aa5.6□□□□□ -1.51
RGD2YFL047W RFM1Q12192 310 aa5.6□□□□□ -1.51
RGD2YFL047W ERG27Q12452 347 aaKnown RBP5.6□□□□□ -1.51
RGD2YFL047W HFA1P32874 2273 aa5.6□□□□□ -1.51
RGD2YFL047W DAD2P36162 133 aa5.6□□□□□ -1.51
RGD2YFL047W YIL163CP40448 117 aa5.6□□□□□ -1.51
RGD2YFL047W LIP2Q06005 328 aa5.6□□□□□ -1.51
RGD2YFL047W MHR1Q06630 226 aa5.6□□□□□ -1.51
RGD2YFL047W PAA1Q12447 191 aaKnown RBP5.6□□□□□ -1.51
RGD2YFL047W YGL258W-AQ3E740 77 aa5.6□□□□□ -1.51
RGD2YFL047W TOR1P35169 2470 aa5.6□□□□□ -1.51
RGD2YFL047W CDC39P25655 2108 aaKnown RBP5.59□□□□□ -1.51
RGD2YFL047W RNA15P25299 296 aaPredicted RBP5.59□□□□□ -1.51
RGD2YFL047W SRP21P32342 167 aa5.59□□□□□ -1.51
RGD2YFL047W MRPL11P36521 249 aaPredicted RBP5.59□□□□□ -1.51
RGD2YFL047W SEC24P40482 926 aaKnown RBP5.59□□□□□ -1.51
RGD2YFL047W YPL067CQ02754 198 aa5.59□□□□□ -1.51
RGD2YFL047W FOL3Q12676 427 aaPredicted RBP5.59□□□□□ -1.51
RGD2YFL047W YMR316C-AI2HB70 103 aa5.59□□□□□ -1.52
RGD2YFL047W GAR1P28007 205 aaKnown RBP5.59□□□□□ -1.52
RGD2YFL047W CPR5P35176 225 aa5.59□□□□□ -1.52
RGD2YFL047W SRP14P38985 146 aa5.59□□□□□ -1.52
RGD2YFL047W ATC1Q04005 294 aa5.59□□□□□ -1.52
RGD2YFL047W ATX2Q12067 313 aa5.59□□□□□ -1.52
RGD2YFL047W GEP5Q12393 293 aa5.59□□□□□ -1.52
RGD2YFL047W ILV5P06168 395 aaKnown RBP5.58□□□□□ -1.52
RGD2YFL047W RPL35AP0CX84 120 aaKnown RBP5.58□□□□□ -1.52
RGD2YFL047W RPL35BP0CX85 120 aaKnown RBP5.58□□□□□ -1.52
RGD2YFL047W HMX1P32339 317 aa5.58□□□□□ -1.52
RGD2YFL047W RPS26AP39938 119 aaKnown RBP5.58□□□□□ -1.52
RGD2YFL047W RPS26BP39939 119 aaKnown RBP5.58□□□□□ -1.52
RGD2YFL047W YEL057CP39983 233 aa5.58□□□□□ -1.52
RGD2YFL047W CYB5P40312 120 aa5.58□□□□□ -1.52
RGD2YFL047W MIC27P50945 234 aa5.58□□□□□ -1.52
RGD2YFL047W LPP1Q04396 274 aa5.58□□□□□ -1.52
RGD2YFL047W MRL1Q06815 381 aa5.58□□□□□ -1.52
RGD2YFL047W CSF1Q12150 2958 aa5.58□□□□□ -1.52
RGD2YFL047W FMP27Q06179 2628 aa5.58□□□□□ -1.52
RGD2YFL047W HEM4P06174 275 aa5.57□□□□□ -1.52
RGD2YFL047W STE4P18851 423 aa5.57□□□□□ -1.52
RGD2YFL047W SPS18P32572 300 aa5.57□□□□□ -1.52
RGD2YFL047W PHD1P36093 366 aa5.57□□□□□ -1.52
RGD2YFL047W YBR090CP38253 122 aa5.57□□□□□ -1.52
RGD2YFL047W UBC13P52490 153 aa5.57□□□□□ -1.52
RGD2YFL047W RPL21AQ02753 160 aaKnown RBP5.57□□□□□ -1.52
RGD2YFL047W YHP1Q04116 353 aa5.57□□□□□ -1.52
RGD2YFL047W RPL21BQ12672 160 aaKnown RBP5.57□□□□□ -1.52
RGD2YFL047W RPL9AP05738 191 aaKnown RBP5.57□□□□□ -1.52
RGD2YFL047W YFL015CP43578 164 aa5.57□□□□□ -1.52
RGD2YFL047W CPD1P53314 239 aa5.57□□□□□ -1.52
RGD2YFL047W POS5Q06892 414 aa5.57□□□□□ -1.52
RGD2YFL047W GAT3Q07928 141 aa5.57□□□□□ -1.52
RGD2YFL047W YOS1Q3E834 85 aa5.57□□□□□ -1.52
RGD2YFL047W RPB10P22139 70 aa5.56□□□□□ -1.52
RGD2YFL047W ACP1P32463 125 aa5.56□□□□□ -1.52
RGD2YFL047W YKL075CP36083 450 aa5.56□□□□□ -1.52
RGD2YFL047W RPN14P53196 417 aa5.56□□□□□ -1.52
RGD2YFL047W YMR166CQ03829 368 aa5.56□□□□□ -1.52
RGD2YFL047W SMT3Q12306 101 aaKnown RBP5.56□□□□□ -1.52
RGD2YFL047W RPS2P25443 254 aaKnown RBP5.56□□□□□ -1.52
RGD2YFL047W PAM17P36147 197 aa5.56□□□□□ -1.52
RGD2YFL047W DMA2P53924 522 aa5.56□□□□□ -1.52
RGD2YFL047W YOR105WQ08504 108 aa5.56□□□□□ -1.52
RGD2YFL047W YOR029WQ12243 111 aa5.56□□□□□ -1.52
RGD2YFL047W TOM40P23644 387 aaKnown RBP5.55□□□□□ -1.52
RGD2YFL047W LDB16P25587 256 aa5.55□□□□□ -1.52
RGD2YFL047W SUA7P29055 345 aaPredicted RBP5.55□□□□□ -1.52
RGD2YFL047W CDC40P40968 455 aaPredicted RBP5.55□□□□□ -1.52
RGD2YFL047W YTH1Q06102 208 aaPredicted RBP5.55□□□□□ -1.52
RGD2YFL047W MCH1Q07376 486 aa5.55□□□□□ -1.52
RGD2YFL047W YCR024C-BQ3E7Z8 88 aa5.55□□□□□ -1.52
RGD2YFL047W YBR184WP38299 523 aa5.54□□□□□ -1.52
RGD2YFL047W PIR5P46999 287 aa5.54□□□□□ -1.52
RGD2YFL047W RPL9BP51401 191 aaKnown RBP5.54□□□□□ -1.52
RGD2YFL047W STD1Q02794 444 aa5.54□□□□□ -1.52
RGD2YFL047W API2Q04413 109 aa5.54□□□□□ -1.52
RGD2YFL047W ERF2Q06551 359 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms