RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YBR220CP38318 560 aa1.74□□□□□ -2.13
SEC4YFL005W CYC2P38909 366 aa1.74□□□□□ -2.13
SEC4YFL005W YER134CP40081 178 aa1.74□□□□□ -2.13
SEC4YFL005W RPL13BP40212 199 aaKnown RBP1.74□□□□□ -2.13
SEC4YFL005W YJR111CP47148 283 aaKnown RBP1.74□□□□□ -2.13
SEC4YFL005W TDA4P47153 279 aa1.74□□□□□ -2.13
SEC4YFL005W MPC3P53311 146 aa1.74□□□□□ -2.13
SEC4YFL005W YPR127WQ06494 345 aa1.74□□□□□ -2.13
SEC4YFL005W RPL13AQ12690 199 aaPredicted RBP1.74□□□□□ -2.13
SEC4YFL005W SEC11P15367 167 aa1.73□□□□□ -2.13
SEC4YFL005W SPO13P23624 291 aa1.73□□□□□ -2.13
SEC4YFL005W ARO7P32178 256 aa1.73□□□□□ -2.13
SEC4YFL005W XPT1P47165 209 aa1.73□□□□□ -2.13
SEC4YFL005W RBL2P48606 106 aaKnown RBP1.73□□□□□ -2.13
SEC4YFL005W TIM13P53299 105 aa1.73□□□□□ -2.13
SEC4YFL005W MPA43P53583 542 aaPredicted RBP1.73□□□□□ -2.13
SEC4YFL005W RAD28Q12021 506 aa1.73□□□□□ -2.13
SEC4YFL005W YDL180WQ12301 547 aa1.73□□□□□ -2.13
SEC4YFL005W MPD1Q12404 318 aaKnown RBP1.73□□□□□ -2.13
SEC4YFL005W UBR2Q07963 1872 aa1.72□□□□□ -2.13
SEC4YFL005W MDS3P53094 1487 aa1.72□□□□□ -2.13
SEC4YFL005W YAR023CD6VPM8 179 aa1.72□□□□□ -2.13
SEC4YFL005W PEX34P25584 144 aa1.72□□□□□ -2.13
SEC4YFL005W CPR5P35176 225 aa1.72□□□□□ -2.13
SEC4YFL005W YKR041WP36134 250 aa1.72□□□□□ -2.13
SEC4YFL005W FMP23P38231 175 aa1.72□□□□□ -2.13
SEC4YFL005W PHB1P40961 287 aa1.72□□□□□ -2.13
SEC4YFL005W HHT1P61830 136 aa1.72□□□□□ -2.13
SEC4YFL005W CSN9Q03981 162 aa1.72□□□□□ -2.13
SEC4YFL005W YOL014WQ08110 124 aa1.72□□□□□ -2.13
SEC4YFL005W ATP14Q12349 124 aa1.72□□□□□ -2.13
SEC4YFL005W RPL2AP0CX45 254 aaKnown RBP1.71□□□□□ -2.14
SEC4YFL005W RPL2BP0CX46 254 aaKnown RBP1.71□□□□□ -2.14
SEC4YFL005W GPA2P10823 449 aa1.71□□□□□ -2.14
SEC4YFL005W RPC19P28000 142 aaKnown RBP1.71□□□□□ -2.14
SEC4YFL005W SUA7P29055 345 aaPredicted RBP1.71□□□□□ -2.14
SEC4YFL005W YKL102CP34249 101 aa1.71□□□□□ -2.14
SEC4YFL005W TVP23P38962 199 aa1.71□□□□□ -2.14
SEC4YFL005W YGR201CP42936 225 aa1.71□□□□□ -2.14
SEC4YFL005W VMA10P48836 114 aaKnown RBP1.71□□□□□ -2.14
SEC4YFL005W YGL101WP53144 215 aa1.71□□□□□ -2.14
SEC4YFL005W PGA1P53896 198 aa1.71□□□□□ -2.14
SEC4YFL005W YMR099CQ03161 297 aaKnown RBP1.71□□□□□ -2.14
SEC4YFL005W GPI17Q04080 534 aa1.71□□□□□ -2.14
SEC4YFL005W SPC24Q04477 213 aa1.71□□□□□ -2.14
SEC4YFL005W YML100W-AQ8TGT0 57 aa1.71□□□□□ -2.14
SEC4YFL005W FAS1P07149 2051 aaKnown RBP1.7□□□□□ -2.14
SEC4YFL005W FPR1P20081 114 aaKnown RBP1.7□□□□□ -2.14
SEC4YFL005W IPI1P38803 334 aaPredicted RBP1.7□□□□□ -2.14
SEC4YFL005W APQ12P40532 138 aa1.7□□□□□ -2.14
SEC4YFL005W CCC1P47818 322 aa1.7□□□□□ -2.14
SEC4YFL005W DYN2Q02647 92 aa1.7□□□□□ -2.14
SEC4YFL005W MZM1Q03429 123 aaPredicted RBP1.7□□□□□ -2.14
SEC4YFL005W YMR295CQ03559 197 aa1.7□□□□□ -2.14
SEC4YFL005W YOR342CQ12182 319 aa1.7□□□□□ -2.14
SEC4YFL005W YLR046CQ12253 270 aa1.7□□□□□ -2.14
SEC4YFL005W PST2Q12335 198 aaKnown RBP1.7□□□□□ -2.14
SEC4YFL005W SLO1Q3E784 85 aa1.7□□□□□ -2.14
SEC4YFL005W QCR8P08525 94 aa1.69□□□□□ -2.14
SEC4YFL005W YCR023CP25351 611 aa1.69□□□□□ -2.14
SEC4YFL005W RFC2P40348 353 aa1.69□□□□□ -2.14
SEC4YFL005W DLS1P40366 167 aa1.69□□□□□ -2.14
SEC4YFL005W YJR015WP47090 510 aa1.69□□□□□ -2.14
SEC4YFL005W HHO1P53551 258 aa1.69□□□□□ -2.14
SEC4YFL005W LSM3P57743 89 aaKnown RBP1.69□□□□□ -2.14
SEC4YFL005W UBC7Q02159 165 aa1.69□□□□□ -2.14
SEC4YFL005W GRX5Q02784 150 aa1.69□□□□□ -2.14
SEC4YFL005W SDH7Q04401 133 aa1.69□□□□□ -2.14
SEC4YFL005W SHH3Q04487 196 aa1.69□□□□□ -2.14
SEC4YFL005W YDR278CQ05612 105 aa1.69□□□□□ -2.14
SEC4YFL005W NAT3Q06504 195 aa1.69□□□□□ -2.14
SEC4YFL005W YPD1Q07688 167 aa1.69□□□□□ -2.14
SEC4YFL005W STP22P25604 385 aa1.68□□□□□ -2.14
SEC4YFL005W UBC8P28263 218 aa1.68□□□□□ -2.14
SEC4YFL005W NSG1P38837 291 aa1.68□□□□□ -2.14
SEC4YFL005W GLR1P41921 483 aaKnown RBP1.68□□□□□ -2.14
SEC4YFL005W HSK3P69852 69 aa1.68□□□□□ -2.14
SEC4YFL005W YDR366CP87287 132 aa1.68□□□□□ -2.14
SEC4YFL005W YDR391CQ04170 232 aa1.68□□□□□ -2.14
SEC4YFL005W YPR174CQ06616 221 aaPredicted RBP1.68□□□□□ -2.14
SEC4YFL005W YHR007C-AQ07074 71 aa1.68□□□□□ -2.14
SEC4YFL005W RFU1Q08003 200 aa1.68□□□□□ -2.14
SEC4YFL005W YLR361C-AQ3E795 98 aa1.68□□□□□ -2.14
SEC4YFL005W UBI4P0CG63 381 aaKnown RBP1.67□□□□□ -2.14
SEC4YFL005W TIR1P10863 254 aa1.67□□□□□ -2.14
SEC4YFL005W MRPL24P36525 258 aaPredicted RBP1.67□□□□□ -2.14
SEC4YFL005W SLM6P38343 150 aa1.67□□□□□ -2.14
SEC4YFL005W PRS3P38689 320 aaKnown RBP1.67□□□□□ -2.14
SEC4YFL005W YPL073CP40323 161 aa1.67□□□□□ -2.14
SEC4YFL005W YFL019CP43576 117 aa1.67□□□□□ -2.14
SEC4YFL005W GPI14P47088 403 aaKnown RBP1.67□□□□□ -2.14
SEC4YFL005W YGR039WP53225 103 aa1.67□□□□□ -2.14
SEC4YFL005W COF1Q03048 143 aaKnown RBP1.67□□□□□ -2.14
SEC4YFL005W VPS71Q03433 280 aa1.67□□□□□ -2.14
SEC4YFL005W NKP2Q06162 153 aa1.67□□□□□ -2.14
SEC4YFL005W IRC23Q08416 157 aa1.67□□□□□ -2.14
SEC4YFL005W YPR202WQ08993 238 aa1.67□□□□□ -2.14
SEC4YFL005W YLR412C-AQ3E742 68 aa1.67□□□□□ -2.14
SEC4YFL005W RPO41P13433 1351 aaKnown RBP1.67□□□□□ -2.14
SEC4YFL005W RAD50P12753 1312 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms