RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C YJL118WP47022 219 aa6.16□□□□□ -1.42
CDC13YDL220C UBC11P52492 156 aa6.16□□□□□ -1.42
CDC13YDL220C YIP5P53108 310 aa6.16□□□□□ -1.42
CDC13YDL220C WSC2P53832 503 aa6.16□□□□□ -1.42
CDC13YDL220C ALG9P53868 555 aaKnown RBP6.16□□□□□ -1.42
CDC13YDL220C YTH1Q06102 208 aaPredicted RBP6.16□□□□□ -1.42
CDC13YDL220C YCR024C-BQ3E7Z8 88 aa6.16□□□□□ -1.42
CDC13YDL220C YCR100CP25606 316 aa6.15□□□□□ -1.42
CDC13YDL220C AGA2P32781 87 aa6.15□□□□□ -1.42
CDC13YDL220C YIL059CP40520 121 aa6.15□□□□□ -1.42
CDC13YDL220C SCD6P45978 349 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
CDC13YDL220C ATG21Q02887 496 aa6.15□□□□□ -1.42
CDC13YDL220C OPI10Q08202 246 aa6.15□□□□□ -1.42
CDC13YDL220C PEX11Q12462 236 aa6.15□□□□□ -1.42
CDC13YDL220C VID24P38263 362 aa6.15□□□□□ -1.43
CDC13YDL220C MRPL1Q04599 285 aa6.15□□□□□ -1.43
CDC13YDL220C ATG40Q99325 256 aa6.15□□□□□ -1.43
CDC13YDL220C FMP49A0A023PZB3 126 aa6.14□□□□□ -1.43
CDC13YDL220C RPL12AP0CX53 165 aaKnown RBP6.14□□□□□ -1.43
CDC13YDL220C RPL12BP0CX54 165 aa6.14□□□□□ -1.43
CDC13YDL220C KTI12P34253 313 aaKnown RBP6.14□□□□□ -1.43
CDC13YDL220C YGP1P38616 354 aaKnown RBP6.14□□□□□ -1.43
CDC13YDL220C YFR057WP43625 151 aa6.14□□□□□ -1.43
CDC13YDL220C PRY1P47032 299 aa6.14□□□□□ -1.43
CDC13YDL220C XPT1P47165 209 aa6.14□□□□□ -1.43
CDC13YDL220C YOR376WQ08900 122 aa6.14□□□□□ -1.43
CDC13YDL220C SWT1Q12104 458 aa6.14□□□□□ -1.43
CDC13YDL220C YOR338WQ99326 363 aa6.14□□□□□ -1.43
CDC13YDL220C SPO13P23624 291 aa6.14□□□□□ -1.43
CDC13YDL220C ERG8P24521 451 aa6.14□□□□□ -1.43
CDC13YDL220C YBR292CP38357 123 aa6.14□□□□□ -1.43
CDC13YDL220C YJL213WP40896 331 aa6.14□□□□□ -1.43
CDC13YDL220C AIM34Q03673 198 aa6.14□□□□□ -1.43
CDC13YDL220C AIM7Q12156 149 aa6.14□□□□□ -1.43
CDC13YDL220C SLG1P54867 378 aa6.13□□□□□ -1.43
CDC13YDL220C FCF1Q05498 189 aaPredicted RBP6.13□□□□□ -1.43
CDC13YDL220C STP3Q05937 343 aa6.13□□□□□ -1.43
CDC13YDL220C MRS1P07266 363 aa6.13□□□□□ -1.43
CDC13YDL220C PHO85P17157 305 aa6.13□□□□□ -1.43
CDC13YDL220C SGE1P33335 543 aa6.13□□□□□ -1.43
CDC13YDL220C PAM17P36147 197 aa6.13□□□□□ -1.43
CDC13YDL220C SYM1Q06563 197 aa6.13□□□□□ -1.43
CDC13YDL220C DGA1Q08650 418 aa6.13□□□□□ -1.43
CDC13YDL220C TAD3Q9URQ3 322 aa6.13□□□□□ -1.43
CDC13YDL220C CSL4P53859 292 aaPredicted RBP6.12□□□□□ -1.43
CDC13YDL220C YDL242WQ07746 117 aa6.12□□□□□ -1.43
CDC13YDL220C RNQ1P25367 405 aa6.12□□□□□ -1.43
CDC13YDL220C SRP21P32342 167 aa6.12□□□□□ -1.43
CDC13YDL220C TIM23P32897 222 aa6.12□□□□□ -1.43
CDC13YDL220C CMC1P36064 111 aa6.12□□□□□ -1.43
CDC13YDL220C PHO88P38264 188 aaPredicted RBP6.12□□□□□ -1.43
CDC13YDL220C ECM14P38836 430 aa6.12□□□□□ -1.43
CDC13YDL220C YIL169CP40442 995 aa6.12□□□□□ -1.43
CDC13YDL220C EGT2P42835 1041 aa6.12□□□□□ -1.43
CDC13YDL220C BET5Q03630 159 aa6.12□□□□□ -1.43
CDC13YDL220C YPR071WQ12346 211 aa6.12□□□□□ -1.43
CDC13YDL220C CDC21P06785 304 aa6.12□□□□□ -1.43
CDC13YDL220C CPT1P17898 393 aa6.12□□□□□ -1.43
CDC13YDL220C GPX1P36014 167 aa6.12□□□□□ -1.43
CDC13YDL220C YBR090CP38253 122 aa6.12□□□□□ -1.43
CDC13YDL220C YCK3P39962 524 aa6.12□□□□□ -1.43
CDC13YDL220C MZM1Q03429 123 aaPredicted RBP6.12□□□□□ -1.43
CDC13YDL220C YDL218WQ07629 317 aa6.12□□□□□ -1.43
CDC13YDL220C FCY1Q12178 158 aa6.12□□□□□ -1.43
CDC13YDL220C POM34Q12445 299 aa6.12□□□□□ -1.43
CDC13YDL220C HXT4P32467 576 aa6.11□□□□□ -1.43
CDC13YDL220C SHB17P36136 271 aaKnown RBP6.11□□□□□ -1.43
CDC13YDL220C RPL34AP87262 121 aaPredicted RBP6.11□□□□□ -1.43
CDC13YDL220C YPQ1Q12010 308 aa6.11□□□□□ -1.43
CDC13YDL220C CTA1P15202 515 aa6.11□□□□□ -1.43
CDC13YDL220C SPS18P32572 300 aa6.11□□□□□ -1.43
CDC13YDL220C ALG13P53178 202 aa6.11□□□□□ -1.43
CDC13YDL220C RHO5P53879 331 aaKnown RBP6.11□□□□□ -1.43
CDC13YDL220C SPG3Q04398 127 aaPredicted RBP6.11□□□□□ -1.43
CDC13YDL220C YPR098CQ06089 161 aa6.11□□□□□ -1.43
CDC13YDL220C MRPL51Q06090 140 aaPredicted RBP6.11□□□□□ -1.43
CDC13YDL220C AUR1P36107 401 aaPredicted RBP6.1□□□□□ -1.43
CDC13YDL220C YMR320WQ04897 101 aa6.1□□□□□ -1.43
CDC13YDL220C XYL2Q07993 356 aa6.1□□□□□ -1.43
CDC13YDL220C YCR025CP25352 136 aa6.1□□□□□ -1.43
CDC13YDL220C ARP3P47117 449 aaKnown RBP6.1□□□□□ -1.43
CDC13YDL220C BXI1P48558 297 aa6.1□□□□□ -1.43
CDC13YDL220C YMR082CQ04276 118 aa6.1□□□□□ -1.43
CDC13YDL220C CSE2P33308 149 aa6.09□□□□□ -1.43
CDC13YDL220C DUT1P33317 147 aa6.09□□□□□ -1.43
CDC13YDL220C XBP1P40489 647 aa6.09□□□□□ -1.43
CDC13YDL220C CTK2P46962 323 aa6.09□□□□□ -1.43
CDC13YDL220C CCH1P50077 2039 aa6.09□□□□□ -1.43
CDC13YDL220C YNR040WP53736 256 aa6.09□□□□□ -1.43
CDC13YDL220C COX9P07255 59 aa6.09□□□□□ -1.43
CDC13YDL220C YLL053CP0CD98 152 aa6.09□□□□□ -1.43
CDC13YDL220C YOL162WP0CF19 215 aa6.09□□□□□ -1.43
CDC13YDL220C UBC5P15732 148 aa6.09□□□□□ -1.43
CDC13YDL220C FRM2P37261 193 aa6.09□□□□□ -1.43
CDC13YDL220C BAT2P47176 376 aaKnown RBP6.09□□□□□ -1.43
CDC13YDL220C KNH1P50112 268 aa6.09□□□□□ -1.43
CDC13YDL220C COA2Q3E823 68 aa6.09□□□□□ -1.43
CDC13YDL220C YLR149CQ99296 730 aa6.09□□□□□ -1.43
CDC13YDL220C VMA11P32842 164 aa6.08□□□□□ -1.44
CDC13YDL220C YFR020WP43600 232 aa6.08□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms