RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	SEC11	P15367	167 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	PAM17	P36147	197 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	YFR054C	P43622	192 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	YGL101W	P53144	215 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	GRX5	Q02784	150 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	YOR214C	Q12282	236 aa		3.21	□□□□□ -1.89
RPN5	YDL147W	IDP1	P21954	428 aa	Known RBP	3.2	□□□□□ -1.9
RPN5	YDL147W	SOL1	P50278	321 aa		3.2	□□□□□ -1.9
RPN5	YDL147W	VPS28	Q02767	242 aa		3.2	□□□□□ -1.9
RPN5	YDL147W	YPR174C	Q06616	221 aa	Predicted RBP	3.2	□□□□□ -1.9
RPN5	YDL147W	FYV12	Q08559	129 aa		3.2	□□□□□ -1.9
RPN5	YDL147W	FLO9	P39712	1322 aa		3.2	□□□□□ -1.9
RPN5	YDL147W	STP22	P25604	385 aa		3.19	□□□□□ -1.9
RPN5	YDL147W	TMA19	P35691	167 aa	Known RBP	3.19	□□□□□ -1.9
RPN5	YDL147W	YPR127W	Q06494	345 aa		3.19	□□□□□ -1.9
RPN5	YDL147W	DAS2	Q12084	232 aa		3.19	□□□□□ -1.9
RPN5	YDL147W	THI74	Q04083	370 aa		3.19	□□□□□ -1.9
RPN5	YDL147W	BUB2	P26448	306 aa	Predicted RBP	3.18	□□□□□ -1.9
RPN5	YDL147W	YNL033W	P53964	284 aa		3.18	□□□□□ -1.9
RPN5	YDL147W	GAL83	Q04739	417 aa		3.18	□□□□□ -1.9
RPN5	YDL147W	ATP20	Q12233	115 aa		3.18	□□□□□ -1.9
RPN5	YDL147W	PBI2	P0CT04	75 aa	Known RBP	3.17	□□□□□ -1.9
RPN5	YDL147W	YCR023C	P25351	611 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	HSP30	P25619	332 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	NUF2	P33895	451 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	VMA22	P38784	181 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	YPL073C	P40323	161 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	GLR1	P41921	483 aa	Known RBP	3.17	□□□□□ -1.9
RPN5	YDL147W	IGO1	P53897	168 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	YPR013C	Q12145	317 aa		3.17	□□□□□ -1.9
RPN5	YDL147W	CSH1	P38287	376 aa		3.16	□□□□□ -1.9
RPN5	YDL147W	YKR005C	Q02203	525 aa		3.16	□□□□□ -1.9
RPN5	YDL147W	EFG1	Q3E705	233 aa	Known RBP	3.16	□□□□□ -1.9
RPN5	YDL147W	PET20	Q99373	253 aa		3.16	□□□□□ -1.9
RPN5	YDL147W	YBR219C	P38317	127 aa		3.15	□□□□□ -1.91
RPN5	YDL147W	YHR007C-A	Q07074	71 aa		3.15	□□□□□ -1.91
RPN5	YDL147W	RAD6	P06104	172 aa		3.14	□□□□□ -1.91
RPN5	YDL147W	PHO85	P17157	305 aa		3.14	□□□□□ -1.91
RPN5	YDL147W	CPR5	P35176	225 aa		3.14	□□□□□ -1.91
RPN5	YDL147W	YBR220C	P38318	560 aa		3.14	□□□□□ -1.91
RPN5	YDL147W	YNL200C	P40165	246 aa	Known RBP	3.14	□□□□□ -1.91
RPN5	YDL147W	PRP11	Q07350	266 aa	Predicted RBP	3.14	□□□□□ -1.91
RPN5	YDL147W	UBI4	P0CG63	381 aa	Known RBP	3.13	□□□□□ -1.91
RPN5	YDL147W	SFK1	P35735	353 aa		3.13	□□□□□ -1.91
RPN5	YDL147W	RRT1	P38192	103 aa		3.13	□□□□□ -1.91
RPN5	YDL147W	LSM3	P57743	89 aa	Known RBP	3.13	□□□□□ -1.91
RPN5	YDL147W	PEX34	P25584	144 aa		3.12	□□□□□ -1.91
RPN5	YDL147W	SRP102	P36057	244 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN5	YDL147W	FYV4	P38783	130 aa	Predicted RBP	3.12	□□□□□ -1.91
RPN5	YDL147W	YER135C	P40082	130 aa		3.12	□□□□□ -1.91
RPN5	YDL147W	RIO2	P40160	425 aa	Known RBP	3.12	□□□□□ -1.91
RPN5	YDL147W	GSP2	P32836	220 aa	Known RBP	3.11	□□□□□ -1.91
RPN5	YDL147W	DAD4	P69851	72 aa		3.11	□□□□□ -1.91
RPN5	YDL147W	PIR1	Q03178	341 aa		3.11	□□□□□ -1.91
RPN5	YDL147W	RNH202	Q05635	350 aa		3.11	□□□□□ -1.91
RPN5	YDL147W	YPR202W	Q08993	238 aa		3.11	□□□□□ -1.91
RPN5	YDL147W	YLR046C	Q12253	270 aa		3.11	□□□□□ -1.91
RPN5	YDL147W	TRM3	Q07527	1436 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	YKR045C	P36138	183 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	SLM6	P38343	150 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	APQ12	P40532	138 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	NQM1	P53228	333 aa	Predicted RBP	3.1	□□□□□ -1.91
RPN5	YDL147W	HHT1	P61830	136 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	YOR015W	Q12169	119 aa		3.1	□□□□□ -1.91
RPN5	YDL147W	DLS1	P40366	167 aa		3.09	□□□□□ -1.91
RPN5	YDL147W	RPL2A	P0CX45	254 aa	Known RBP	3.08	□□□□□ -1.92
RPN5	YDL147W	RPL2B	P0CX46	254 aa	Known RBP	3.08	□□□□□ -1.92
RPN5	YDL147W	YLR162W	Q06235	118 aa		3.08	□□□□□ -1.92
RPN5	YDL147W	CSI2	Q08054	341 aa		3.08	□□□□□ -1.92
RPN5	YDL147W	MDM35	O60200	86 aa		3.07	□□□□□ -1.92
RPN5	YDL147W	COX8	P04039	78 aa		3.07	□□□□□ -1.92
RPN5	YDL147W	PET54	P10834	293 aa		3.07	□□□□□ -1.92
RPN5	YDL147W	YHL018W	P38744	120 aa	Predicted RBP	3.07	□□□□□ -1.92
RPN5	YDL147W	ORM1	P53224	222 aa		3.07	□□□□□ -1.92
RPN5	YDL147W	ATP5	P09457	212 aa		3.06	□□□□□ -1.92
RPN5	YDL147W	RPL30	P14120	105 aa	Known RBP	3.06	□□□□□ -1.92
RPN5	YDL147W	YEL028W	P39989	153 aa		3.06	□□□□□ -1.92
RPN5	YDL147W	THG1	P53215	237 aa	Known RBP	3.06	□□□□□ -1.92
RPN5	YDL147W	YDR391C	Q04170	232 aa		3.06	□□□□□ -1.92
RPN5	YDL147W	SYM1	Q06563	197 aa		3.06	□□□□□ -1.92
RPN5	YDL147W	CYR1	P08678	2026 aa	Known RBP	3.06	□□□□□ -1.92
RPN5	YDL147W	MSB2	P32334	1306 aa		3.06	□□□□□ -1.92
RPN5	YDL147W	YLR422W	Q06409	1932 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	QCR8	P08525	94 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	YOL162W	P0CF19	215 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	PTC1	P35182	281 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	RPL13B	P40212	199 aa	Known RBP	3.05	□□□□□ -1.92
RPN5	YDL147W	MOG1	P47123	218 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	HRD1	Q08109	551 aa		3.05	□□□□□ -1.92
RPN5	YDL147W	RPL13A	Q12690	199 aa	Predicted RBP	3.05	□□□□□ -1.92
RPN5	YDL147W	GPA2	P10823	449 aa		3.04	□□□□□ -1.92
RPN5	YDL147W	YAP3	P38749	330 aa		3.04	□□□□□ -1.92
RPN5	YDL147W	YEL073C	P39974	107 aa		3.04	□□□□□ -1.92
RPN5	YDL147W	PKR1	Q03880	122 aa	Known RBP	3.04	□□□□□ -1.92
RPN5	YDL147W	UPS3	Q04006	179 aa		3.04	□□□□□ -1.92
RPN5	YDL147W	LSM1	P47017	172 aa	Known RBP	3.03	□□□□□ -1.92
RPN5	YDL147W	BAT2	P47176	376 aa	Known RBP	3.03	□□□□□ -1.92
RPN5	YDL147W	DML1	Q03652	475 aa		3.03	□□□□□ -1.92
RPN5	YDL147W	RAV2	Q03956	351 aa		3.03	□□□□□ -1.92
RPN5	YDL147W	RIM9	Q04734	239 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms