RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C RAD23P32628 398 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C AGA2P32781 87 aa1.77□□□□□ -2.13
BRE1YDL074C REC104P33323 182 aa1.77□□□□□ -2.13
BRE1YDL074C NTF2P33331 125 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C SSS1P35179 80 aa1.77□□□□□ -2.13
BRE1YDL074C QDR3P38227 689 aa1.77□□□□□ -2.13
BRE1YDL074C YHL037CP38733 133 aa1.77□□□□□ -2.13
BRE1YDL074C MTC6P38849 526 aa1.77□□□□□ -2.13
BRE1YDL074C LSM4P40070 187 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C YER121WP40076 114 aa1.77□□□□□ -2.13
BRE1YDL074C SGN1P40561 250 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
BRE1YDL074C GON7P46984 123 aa1.77□□□□□ -2.13
BRE1YDL074C YJL118WP47022 219 aa1.77□□□□□ -2.13
BRE1YDL074C BNA1P47096 177 aa1.77□□□□□ -2.13
BRE1YDL074C BNA2P47125 453 aa1.77□□□□□ -2.13
BRE1YDL074C YGL185CP53100 379 aa1.77□□□□□ -2.13
BRE1YDL074C YGL114WP53134 725 aa1.77□□□□□ -2.13
BRE1YDL074C SMM1P53720 384 aaKnown RBP1.77□□□□□ -2.13
BRE1YDL074C YNR064CP53750 290 aa1.77□□□□□ -2.13
BRE1YDL074C FYV6P53913 173 aa1.77□□□□□ -2.13
BRE1YDL074C SHH3Q04487 196 aa1.77□□□□□ -2.13
BRE1YDL074C LOA1Q06508 300 aa1.77□□□□□ -2.13
BRE1YDL074C PML1Q07930 204 aaPredicted RBP1.77□□□□□ -2.13
BRE1YDL074C IRC25Q07951 179 aa1.77□□□□□ -2.13
BRE1YDL074C MED7Q08278 222 aa1.77□□□□□ -2.13
BRE1YDL074C NCE102Q12207 173 aaRIP-Chip data1.77□□□□□ -2.13not detected
BRE1YDL074C RNH203Q12338 110 aa1.77□□□□□ -2.13
BRE1YDL074C TY1A-DR3Q12441 440 aa1.77□□□□□ -2.13
BRE1YDL074C YPR145C-AQ2V2P0 78 aa1.77□□□□□ -2.13
BRE1YDL074C YOR192C-CQ3E736 78 aa1.77□□□□□ -2.13
BRE1YDL074C YCR025CP25352 136 aa1.76□□□□□ -2.13
BRE1YDL074C POF1P25576 258 aa1.76□□□□□ -2.13
BRE1YDL074C IES6P32617 166 aa1.76□□□□□ -2.13
BRE1YDL074C RPL14AP36105 138 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C AVT5P38176 459 aa1.76□□□□□ -2.13
BRE1YDL074C YBL071CP38185 102 aa1.76□□□□□ -2.13
BRE1YDL074C DER1P38307 211 aa1.76□□□□□ -2.13
BRE1YDL074C RPL14BP38754 138 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C PTC7P38797 343 aa1.76□□□□□ -2.13
BRE1YDL074C FLO5P38894 1075 aa1.76□□□□□ -2.13
BRE1YDL074C YAR068WP39564 161 aa1.76□□□□□ -2.13
BRE1YDL074C YGR269WP40326 108 aa1.76□□□□□ -2.13
BRE1YDL074C BNS1P50084 137 aa1.76□□□□□ -2.13
BRE1YDL074C YNR071CP53757 342 aa1.76□□□□□ -2.13
BRE1YDL074C HCH1P53834 153 aa1.76□□□□□ -2.13
BRE1YDL074C STD1Q02794 444 aa1.76□□□□□ -2.13
BRE1YDL074C YPL108WQ02872 168 aaPredicted RBP1.76□□□□□ -2.13
BRE1YDL074C CUE4Q04201 117 aaPredicted RBP1.76□□□□□ -2.13
BRE1YDL074C PAA1Q12447 191 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C RAX2Q12465 1220 aa1.76□□□□□ -2.13
BRE1YDL074C YBR255C-AQ3E776 120 aa1.76□□□□□ -2.13
BRE1YDL074C RPS22BQ3E7Y3 130 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C YOS1Q3E834 85 aa1.76□□□□□ -2.13
BRE1YDL074C HTB1P02293 131 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C HMRA1P0CY11 126 aa1.76□□□□□ -2.13
BRE1YDL074C RNA15P25299 296 aaPredicted RBP1.76□□□□□ -2.13
BRE1YDL074C GPI18P38211 433 aa1.76□□□□□ -2.13
BRE1YDL074C SDH8P38345 138 aa1.76□□□□□ -2.13
BRE1YDL074C IMD2P38697 523 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C YFL054CP43549 646 aa1.76□□□□□ -2.13
BRE1YDL074C LOC1P43586 204 aaPredicted RBP1.76□□□□□ -2.13
BRE1YDL074C ATG27P46989 271 aa1.76□□□□□ -2.13
BRE1YDL074C PIR5P46999 287 aa1.76□□□□□ -2.13
BRE1YDL074C TAX4P47030 604 aa1.76□□□□□ -2.13
BRE1YDL074C YJR015WP47090 510 aa1.76□□□□□ -2.13
BRE1YDL074C SBH2P52871 88 aa1.76□□□□□ -2.13
BRE1YDL074C TEX1P53851 422 aaKnown RBP1.76□□□□□ -2.13
BRE1YDL074C SKO1Q02100 647 aa1.76□□□□□ -2.13
BRE1YDL074C MRX11Q03079 207 aa1.76□□□□□ -2.13
BRE1YDL074C ARR3Q06598 404 aa1.76□□□□□ -2.13
BRE1YDL074C YOR105WQ08504 108 aa1.76□□□□□ -2.13
BRE1YDL074C POM33Q12164 279 aa1.76□□□□□ -2.13
BRE1YDL074C RKI1Q12189 258 aa1.76□□□□□ -2.13
BRE1YDL074C YPR071WQ12346 211 aa1.76□□□□□ -2.13
BRE1YDL074C DFR1P07807 211 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
BRE1YDL074C FRS1P15624 595 aaKnown RBP1.75□□□□□ -2.13
BRE1YDL074C NOP1P15646 327 aaKnown RBP1.75□□□□□ -2.13
BRE1YDL074C MRPL20P22354 195 aaPredicted RBP1.75□□□□□ -2.13
BRE1YDL074C YKL187CP34231 750 aa1.75□□□□□ -2.13
BRE1YDL074C YNK1P36010 153 aaKnown RBP1.75□□□□□ -2.13
BRE1YDL074C PMU1P36069 295 aa1.75□□□□□ -2.13
BRE1YDL074C RRT1P38192 103 aa1.75□□□□□ -2.13
BRE1YDL074C YHR173CP38864 112 aa1.75□□□□□ -2.13
BRE1YDL074C ABM1P47146 123 aa1.75□□□□□ -2.13
BRE1YDL074C LST7P53237 242 aa1.75□□□□□ -2.13
BRE1YDL074C ATP19P81451 68 aa1.75□□□□□ -2.13
BRE1YDL074C DYN2Q02647 92 aa1.75□□□□□ -2.13
BRE1YDL074C ARL3Q02804 198 aa1.75□□□□□ -2.13
BRE1YDL074C YMR007WQ03675 126 aa1.75□□□□□ -2.13
BRE1YDL074C NAT3Q06504 195 aa1.75□□□□□ -2.13
BRE1YDL074C MRL1Q06815 381 aa1.75□□□□□ -2.13
BRE1YDL074C YOL118CQ08259 102 aa1.75□□□□□ -2.13
BRE1YDL074C YDL009CQ12210 107 aa1.75□□□□□ -2.13
BRE1YDL074C FYV7Q12247 151 aa1.75□□□□□ -2.13
BRE1YDL074C ERV2Q12284 196 aa1.75□□□□□ -2.13
BRE1YDL074C UTP23Q12339 254 aaKnown RBP1.75□□□□□ -2.13
BRE1YDL074C CSF1Q12150 2958 aa1.75□□□□□ -2.13
BRE1YDL074C HTB2P02294 131 aa1.75□□□□□ -2.13
BRE1YDL074C PIS1P06197 220 aaKnown RBP1.75□□□□□ -2.13
BRE1YDL074C MRS1P07266 363 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms