RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C UBA3Q99344 299 aa1.04□□□□□ -2.24
MSH3YCR092C SHE2P36068 246 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
MSH3YCR092C ATP3P38077 311 aaKnown RBP1.04□□□□□ -2.24
MSH3YCR092C SLM6P38343 150 aa1.04□□□□□ -2.24
MSH3YCR092C IRC22P40006 225 aa1.04□□□□□ -2.24
MSH3YCR092C ARB1P40024 610 aaKnown RBP1.04□□□□□ -2.24
MSH3YCR092C IMP2P46972 177 aa1.04□□□□□ -2.24
MSH3YCR092C ILM1P47155 203 aa1.04□□□□□ -2.24
MSH3YCR092C TOS8P53147 276 aa1.04□□□□□ -2.24
MSH3YCR092C CTF19Q02732 369 aa1.04□□□□□ -2.24
MSH3YCR092C THI74Q04083 370 aa1.04□□□□□ -2.24
MSH3YCR092C FRQ1Q06389 190 aa1.04□□□□□ -2.24
MSH3YCR092C SDO1Q07953 250 aaKnown RBP1.04□□□□□ -2.24
MSH3YCR092C DCI1Q08558 271 aa1.04□□□□□ -2.24
MSH3YCR092C YDL007C-AQ2V2Q0 85 aa1.04□□□□□ -2.24
MSH3YCR092C ADF1Q2V2Q1 113 aa1.04□□□□□ -2.24
MSH3YCR092C OLE1P21147 510 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C SPO13P23624 291 aa1.03□□□□□ -2.24
MSH3YCR092C NTG1P31378 399 aa1.03□□□□□ -2.24
MSH3YCR092C UTP11P34247 250 aaPredicted RBP1.03□□□□□ -2.24
MSH3YCR092C MRPL3P36516 390 aa1.03□□□□□ -2.24
MSH3YCR092C LST8P41318 303 aa1.03□□□□□ -2.24
MSH3YCR092C IRC18P47056 224 aa1.03□□□□□ -2.24
MSH3YCR092C UBP8P50102 471 aa1.03□□□□□ -2.24
MSH3YCR092C SWT21P53873 357 aaPredicted RBP1.03□□□□□ -2.24
MSH3YCR092C MEH1Q02205 184 aa1.03□□□□□ -2.24
MSH3YCR092C HLR1Q04429 423 aa1.03□□□□□ -2.24
MSH3YCR092C YMR226CQ05016 267 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C COA4Q05809 96 aa1.03□□□□□ -2.24
MSH3YCR092C YCT1Q12235 531 aa1.03□□□□□ -2.24
MSH3YCR092C IES3Q12345 250 aa1.03□□□□□ -2.24
MSH3YCR092C YBR182C-AQ8TGU6 64 aa1.03□□□□□ -2.24
MSH3YCR092C RTC6O14464 93 aa1.03□□□□□ -2.24
MSH3YCR092C RPL33AP05744 107 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C MET17P06106 444 aa1.03□□□□□ -2.24
MSH3YCR092C PET494P07390 489 aaPredicted RBP1.03□□□□□ -2.24
MSH3YCR092C AME1P38313 324 aa1.03□□□□□ -2.24
MSH3YCR092C IMD2P38697 523 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C YNL208WP40159 199 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C RPL33BP41056 107 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C CAT5P41735 233 aa1.03□□□□□ -2.24
MSH3YCR092C GPI2P46961 280 aa1.03□□□□□ -2.24
MSH3YCR092C YJR015WP47090 510 aa1.03□□□□□ -2.24
MSH3YCR092C LYS20P48570 428 aaKnown RBP1.03□□□□□ -2.24
MSH3YCR092C PHB2P50085 310 aa1.03□□□□□ -2.24
MSH3YCR092C YIP3P53633 176 aa1.03□□□□□ -2.24
MSH3YCR092C HST4P53688 370 aa1.03□□□□□ -2.24
MSH3YCR092C BOR1P53838 576 aa1.03□□□□□ -2.24
MSH3YCR092C EST3Q03096 181 aa1.03□□□□□ -2.24
MSH3YCR092C YMR244WQ04018 355 aa1.03□□□□□ -2.24
MSH3YCR092C YLR194CQ05777 254 aa1.03□□□□□ -2.24
MSH3YCR092C PHO92Q06390 306 aa1.03□□□□□ -2.24
MSH3YCR092C HUT1Q12520 339 aa1.03□□□□□ -2.24
MSH3YCR092C RER1P25560 188 aa1.02□□□□□ -2.25
MSH3YCR092C YCR016WP25617 290 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C ERG24P32462 438 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C AGA2P32781 87 aa1.02□□□□□ -2.25
MSH3YCR092C PPQ1P32945 549 aa1.02□□□□□ -2.25
MSH3YCR092C MRPL38P35996 138 aaPredicted RBP1.02□□□□□ -2.25
MSH3YCR092C ERV15P38312 142 aa1.02□□□□□ -2.25
MSH3YCR092C YIL077CP40508 320 aa1.02□□□□□ -2.25
MSH3YCR092C YGR018CP53211 109 aa1.02□□□□□ -2.25
MSH3YCR092C YGR151CP53287 111 aa1.02□□□□□ -2.25
MSH3YCR092C YMR253CQ04835 414 aa1.02□□□□□ -2.25
MSH3YCR092C RRG8Q06109 277 aa1.02□□□□□ -2.25
MSH3YCR092C AEP3Q12089 606 aa1.02□□□□□ -2.25
MSH3YCR092C PET20Q99373 253 aa1.02□□□□□ -2.25
MSH3YCR092C SOD1P00445 154 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C HIS3P06633 220 aa1.02□□□□□ -2.25
MSH3YCR092C MRS1P07266 363 aa1.02□□□□□ -2.25
MSH3YCR092C PET122P10355 254 aa1.02□□□□□ -2.25
MSH3YCR092C TIR1P10863 254 aa1.02□□□□□ -2.25
MSH3YCR092C SNF4P12904 322 aa1.02□□□□□ -2.25
MSH3YCR092C SEN2P16658 377 aa1.02□□□□□ -2.25
MSH3YCR092C PWP1P21304 576 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C SEC22P22214 214 aa1.02□□□□□ -2.25
MSH3YCR092C VMA5P31412 392 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C YKL063CP35725 167 aa1.02□□□□□ -2.25
MSH3YCR092C YCR041WP37265 110 aa1.02□□□□□ -2.25
MSH3YCR092C CTR2P38865 189 aa1.02□□□□□ -2.25
MSH3YCR092C AIM24P47127 394 aa1.02□□□□□ -2.25
MSH3YCR092C VOA1P53262 265 aa1.02□□□□□ -2.25
MSH3YCR092C YNR071CP53757 342 aa1.02□□□□□ -2.25
MSH3YCR092C YNL234WP53857 426 aa1.02□□□□□ -2.25
MSH3YCR092C FMP41P53889 259 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C LCL1Q02786 101 aa1.02□□□□□ -2.25
MSH3YCR092C YPL077CQ02831 240 aa1.02□□□□□ -2.25
MSH3YCR092C SFH1Q06168 426 aa1.02□□□□□ -2.25
MSH3YCR092C KEI1Q06346 221 aa1.02□□□□□ -2.25
MSH3YCR092C MEC1P38111 2368 aa1.02□□□□□ -2.25
MSH3YCR092C AST1P35183 429 aa1.02□□□□□ -2.25
MSH3YCR092C YKR045CP36138 183 aa1.02□□□□□ -2.25
MSH3YCR092C SHG1P38337 142 aa1.02□□□□□ -2.25
MSH3YCR092C YJR056CP47115 236 aa1.02□□□□□ -2.25
MSH3YCR092C YIF1P53845 314 aaKnown RBP1.02□□□□□ -2.25
MSH3YCR092C DIA1P54005 336 aa1.02□□□□□ -2.25
MSH3YCR092C TRI1Q05024 226 aa1.02□□□□□ -2.25
MSH3YCR092C POM34Q12445 299 aa1.02□□□□□ -2.25
MSH3YCR092C QCR9P22289 66 aa1.01□□□□□ -2.25
MSH3YCR092C RNA15P25299 296 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms