RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W CDC43P18898 376 aa4.52□□□□□ -1.69
SHM1YBR263W CNB1P25296 175 aa4.52□□□□□ -1.69
SHM1YBR263W YKL162CP36052 402 aa4.52□□□□□ -1.69
SHM1YBR263W GPP2P40106 250 aaKnown RBP4.52□□□□□ -1.69
SHM1YBR263W RPL13BP40212 199 aaKnown RBP4.52□□□□□ -1.69
SHM1YBR263W WWM1P43582 211 aaKnown RBP4.52□□□□□ -1.69
SHM1YBR263W MSA1Q08471 629 aa4.52□□□□□ -1.69
SHM1YBR263W JID1Q12350 301 aa4.52□□□□□ -1.69
SHM1YBR263W DCN1Q12395 269 aa4.52□□□□□ -1.69
SHM1YBR263W PAA1Q12447 191 aaKnown RBP4.52□□□□□ -1.69
SHM1YBR263W RPL13AQ12690 199 aaPredicted RBP4.52□□□□□ -1.69
SHM1YBR263W YJR112W-AQ3E743 109 aa4.52□□□□□ -1.69
SHM1YBR263W COA2Q3E823 68 aa4.52□□□□□ -1.69
SHM1YBR263W HBN1Q96VH4 193 aa4.52□□□□□ -1.69
SHM1YBR263W HTB1P02293 131 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W NOP1P15646 327 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W STF2P16965 84 aa4.51□□□□□ -1.69
SHM1YBR263W TOM40P23644 387 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W PDC2P32896 925 aa4.51□□□□□ -1.69
SHM1YBR263W CDS1P38221 457 aa4.51□□□□□ -1.69
SHM1YBR263W RFC2P40348 353 aa4.51□□□□□ -1.69
SHM1YBR263W DFG10P40526 253 aa4.51□□□□□ -1.69
SHM1YBR263W YJL213WP40896 331 aa4.51□□□□□ -1.69
SHM1YBR263W YJR111CP47148 283 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W PUS4P48567 403 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W YGR050CP53231 118 aa4.51□□□□□ -1.69
SHM1YBR263W GPI15P53961 229 aa4.51□□□□□ -1.69
SHM1YBR263W ATC1Q04005 294 aa4.51□□□□□ -1.69
SHM1YBR263W AIM45Q12480 344 aaKnown RBP4.51□□□□□ -1.69
SHM1YBR263W YLR146W-AQ2V2P1 62 aa4.51□□□□□ -1.69
SHM1YBR263W YGL194C-AQ2V2P6 80 aa4.51□□□□□ -1.69
SHM1YBR263W ISN1Q99312 450 aa4.51□□□□□ -1.69
SHM1YBR263W YLR415CO13578 112 aa4.5□□□□□ -1.69
SHM1YBR263W ERV1P27882 189 aa4.5□□□□□ -1.69
SHM1YBR263W DAL3P32459 195 aa4.5□□□□□ -1.69
SHM1YBR263W RAD23P32628 398 aaKnown RBP4.5□□□□□ -1.69
SHM1YBR263W GEP4P38812 185 aa4.5□□□□□ -1.69
SHM1YBR263W PNC1P53184 216 aaKnown RBP4.5□□□□□ -1.69
SHM1YBR263W ACT1P60010 375 aaKnown RBP4.5□□□□□ -1.69
SHM1YBR263W EST3Q03096 181 aa4.5□□□□□ -1.69
SHM1YBR263W ERP1Q05359 219 aaKnown RBP4.5□□□□□ -1.69
SHM1YBR263W FYV7Q12247 151 aa4.5□□□□□ -1.69
SHM1YBR263W ATG31Q12421 196 aa4.5□□□□□ -1.69
SHM1YBR263W YGL258W-AQ3E740 77 aa4.5□□□□□ -1.69
SHM1YBR263W YNL162W-AQ3E7A8 72 aa4.5□□□□□ -1.69
SHM1YBR263W URA5P13298 226 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W YCR041WP37265 110 aa4.49□□□□□ -1.69
SHM1YBR263W SEC72P39742 193 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W YEA6P39953 335 aa4.49□□□□□ -1.69
SHM1YBR263W HXT14P42833 540 aa4.49□□□□□ -1.69
SHM1YBR263W TAD2P47058 250 aa4.49□□□□□ -1.69
SHM1YBR263W SDO1Q07953 250 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W YNG1Q08465 219 aa4.49□□□□□ -1.69
SHM1YBR263W YPL264CQ08980 353 aa4.49□□□□□ -1.69
SHM1YBR263W SOD1P00445 154 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W MRP2P10663 115 aaPredicted RBP4.49□□□□□ -1.69
SHM1YBR263W NHP6AP11632 93 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W SLM6P38343 150 aa4.49□□□□□ -1.69
SHM1YBR263W WSS1P38838 269 aa4.49□□□□□ -1.69
SHM1YBR263W GTT1P40582 234 aa4.49□□□□□ -1.69
SHM1YBR263W CAF16P43569 289 aa4.49□□□□□ -1.69
SHM1YBR263W PKP2P53170 491 aa4.49□□□□□ -1.69
SHM1YBR263W HCH1P53834 153 aa4.49□□□□□ -1.69
SHM1YBR263W DIA1P54005 336 aa4.49□□□□□ -1.69
SHM1YBR263W DID2P69771 204 aa4.49□□□□□ -1.69
SHM1YBR263W YMR082CQ04276 118 aa4.49□□□□□ -1.69
SHM1YBR263W YMR090WQ04304 227 aaKnown RBP4.49□□□□□ -1.69
SHM1YBR263W ANT1Q06497 328 aa4.49□□□□□ -1.69
SHM1YBR263W AGC1Q12482 902 aa4.49□□□□□ -1.69
SHM1YBR263W FEN2P25621 512 aaKnown RBP4.48□□□□□ -1.69
SHM1YBR263W INO2P26798 304 aa4.48□□□□□ -1.69
SHM1YBR263W PSD1P39006 500 aa4.48□□□□□ -1.69
SHM1YBR263W YER085CP40058 173 aa4.48□□□□□ -1.69
SHM1YBR263W COX15P40086 486 aa4.48□□□□□ -1.69
SHM1YBR263W LST8P41318 303 aa4.48□□□□□ -1.69
SHM1YBR263W TAX4P47030 604 aa4.48□□□□□ -1.69
SHM1YBR263W ECM27P47144 725 aa4.48□□□□□ -1.69
SHM1YBR263W DYN2Q02647 92 aa4.48□□□□□ -1.69
SHM1YBR263W USV1Q12132 391 aa4.48□□□□□ -1.69
SHM1YBR263W YPS3Q12303 508 aa4.48□□□□□ -1.69
SHM1YBR263W MRPL23Q12487 163 aaPredicted RBP4.48□□□□□ -1.69
SHM1YBR263W MRS3P10566 314 aa4.47□□□□□ -1.69
SHM1YBR263W MAG1P22134 296 aaKnown RBP4.47□□□□□ -1.69
SHM1YBR263W YCR025CP25352 136 aa4.47□□□□□ -1.69
SHM1YBR263W LAC1P28496 418 aa4.47□□□□□ -1.69
SHM1YBR263W AME1P38313 324 aa4.47□□□□□ -1.69
SHM1YBR263W YPT31P38555 223 aaKnown RBP4.47□□□□□ -1.69
SHM1YBR263W PHM8P40025 321 aa4.47□□□□□ -1.69
SHM1YBR263W SWM2P40342 146 aa4.47□□□□□ -1.69
SHM1YBR263W PDR17P53844 350 aa4.47□□□□□ -1.69
SHM1YBR263W SPG4Q04438 115 aa4.47□□□□□ -1.69
SHM1YBR263W POC4Q12245 148 aaPredicted RBP4.47□□□□□ -1.69
SHM1YBR263W EMP24P32803 203 aaKnown RBP4.46□□□□□ -1.7
SHM1YBR263W YNK1P36010 153 aaKnown RBP4.46□□□□□ -1.7
SHM1YBR263W PRS4P38063 326 aaPredicted RBP4.46□□□□□ -1.7
SHM1YBR263W ICS2P38284 255 aa4.46□□□□□ -1.7
SHM1YBR263W NSA2P40078 261 aaKnown RBP4.46□□□□□ -1.7
SHM1YBR263W JAC1P53193 184 aa4.46□□□□□ -1.7
SHM1YBR263W TIM21P53220 239 aa4.46□□□□□ -1.7
SHM1YBR263W LRS4Q04087 347 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms