RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 NDST1P52848 882 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 LIN9Q5TKA1 542 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 SERINC5Q86VE9 423 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 RPS6KC1Q96S38 1066 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 SNX9Q9Y5X1 595 aa23.02■■□□□ 1.28
CHRNA7-228ENST00000637519 SMIM28A0A1B0GU29 152 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 HMGCRP04035 888 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 APLP1P51693 650 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 PTPN11Q06124 597 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 SOX4Q06945 474 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 LLGL1Q15334 1064 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 BEND6Q5SZJ8 279 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 MRPL45Q9BRJ2 306 aaKnown RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 SENP6Q9GZR1 1112 aaPredicted RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 DDX47Q9H0S4 455 aaKnown RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 CARD9Q9H257 536 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 PCDHGC3Q9UN70 934 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 ST3GAL5Q9UNP4 418 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 KRIT1O00522 736 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 PEX5P50542 639 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 RPL7AP62424 266 aaKnown RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 NKX3-2P78367 333 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 C1QBPQ07021 282 aaKnown RBP23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 TMEM35BQ8NCS4 154 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 BEST2Q8NFU1 509 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 RAET1EQ8TD07 263 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 TMEM176AQ96HP8 235 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 GDAP1L1Q96MZ0 367 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 DERAQ9Y315 318 aa23.01■■□□□ 1.27
CHRNA7-228ENST00000637519 ESYT3A0FGR9 886 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 O00370 1275 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 HCRTO43612 131 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 RPS6KA5O75582 802 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 LSM8O95777 96 aaKnown RBP23■■□□□ 1.27
CHRNA7-228ENST00000637519 P4HA1P13674 534 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 THPOP40225 353 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 VEGFBP49765 207 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 PTGISQ16647 500 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 C9orf57Q5W0N0 161 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 PLEKHA7Q6IQ23 1121 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 CCDC70Q6NSX1 233 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 UBL4BQ8N7F7 174 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 CALR3Q96L12 384 aaKnown RBP23■■□□□ 1.27
CHRNA7-228ENST00000637519 ZFP42Q96MM3 310 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 CYP3A43Q9HB55 503 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 TRMT13Q9NUP7 481 aaKnown RBP23■■□□□ 1.27
CHRNA7-228ENST00000637519 CACNG4Q9UBN1 327 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 NME7Q9Y5B8 376 aa23■■□□□ 1.27
CHRNA7-228ENST00000637519 MIF4GDA9UHW6 222 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 RAD51CO43502 376 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 GLI1P08151 1106 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 IBSPP21815 317 aaPredicted RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 CTNNA1P35221 906 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 MYO1EQ12965 1108 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 PTPN20Q4JDL3 420 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 MAP3K21Q5TCX8 1036 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 HEXIM2Q96MH2 286 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 AGO3Q9H9G7 860 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 DDX20Q9UHI6 824 aaKnown RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 MYO1FO00160 1098 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 PAEPP09466 180 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 PYGMP11217 842 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 C12orf29Q8N999 325 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 WNT8AQ9H1J5 351 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 ERVK-5Q9HDB9 667 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 STIM2Q9P246 746 aa22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 BARX2Q9UMQ3 279 aaPredicted RBP22.99■■□□□ 1.27
CHRNA7-228ENST00000637519 SPTLC1O15269 473 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 TLR3O15455 904 aaKnown RBP22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 RRP9O43818 475 aaKnown RBP22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 MICAL2O94851 1124 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 STAU1O95793 577 aaKnown RBP22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 CYP3A5P20815 502 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 CDH5P33151 784 aaPredicted RBP22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 MGAT3Q09327 533 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 INCA1Q0VD86 236 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 RSPH3Q86UC2 560 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 VCPIP1Q96JH7 1222 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 FUT8Q9BYC5 575 aa22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 UBQLN1Q9UMX0 589 aaKnown RBP22.98■■□□□ 1.27
CHRNA7-228ENST00000637519 ERLIN1O75477 346 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 AFF1P51825 1210 aaKnown RBP22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 TRADDQ15628 312 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 HNRNPLLQ8WVV9 542 aaKnown RBP22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 LPPQ93052 612 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 MCEEQ96PE7 176 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 USTQ9Y2C2 406 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 CEP83Q9Y592 693 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 PCDHA3Q9Y5H8 950 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 M0QYV0 167 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 HEXIM1O94992 359 aaKnown RBP22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 IGFBP6P24592 240 aaPredicted RBP22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 CST5P28325 142 aaPredicted RBP22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 ERICH1Q86X53 443 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 UBA3Q8TBC4 463 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 FAXDC2Q96IV6 333 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 CPXM1Q96SM3 734 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 LPIN3Q9BQK8 851 aa22.97■■□□□ 1.27
CHRNA7-228ENST00000637519 TCRBV5S1A1TA0A578 114 aa22.96■■□□□ 1.27
CHRNA7-228ENST00000637519 TCRBV7S2A1N4TA0A589 114 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms