RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 SSTR3P32745 418 aaPredicted RBP19.62■□□□□ 0.73
CLN8-211ENST00000636934 GTF2A2P52657 109 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 SNX1Q13596 522 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 SCARA5Q6ZMJ2 495 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 C3orf20Q8ND61 904 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 SCLT1Q96NL6 688 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 BCO2Q9BYV7 579 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 FAM124BQ9H5Z6 455 aaPredicted RBP19.62■□□□□ 0.73
CLN8-211ENST00000636934 MINDY3Q9H8M7 445 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 CYP3A43Q9HB55 503 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 IFT122Q9HBG6 1241 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 CHST7Q9NS84 486 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 NOVA2Q9UNW9 492 aaKnown RBP19.62■□□□□ 0.73
CLN8-211ENST00000636934 AKT3Q9Y243 479 aa19.62■□□□□ 0.73
CLN8-211ENST00000636934 PLXNA1Q9UIW2 1896 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 PDHXO00330 501 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 ZNF365Q70YC5 407 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 TTC39CQ8N584 583 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 NIPA2Q8N8Q9 360 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 CCDC89Q8N998 374 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 CCHCR1Q8TD31 782 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 TLCD1Q96CP7 247 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 CCDC114Q96M63 670 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 EPB41L4BQ9H329 900 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.61■□□□□ 0.73
CLN8-211ENST00000636934 WDR35Q9P2L0 1181 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 MORF4L1Q9UBU8 362 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 NXF1Q9UBU9 619 aaKnown RBP19.61■□□□□ 0.73
CLN8-211ENST00000636934 SCN4AP35499 1836 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 ANK1P16157 1881 aa19.61■□□□□ 0.73
CLN8-211ENST00000636934 TCRBV5S1A1TA0A578 114 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 GLTPD2A6NH11 291 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 NDUFAB1O14561 156 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 TJP3O95049 919 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 PTPN7P35236 360 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 GUCY1A3Q02108 690 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 NFX1Q12986 1120 aaKnown RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 PTGISQ16647 500 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 ZNF394Q53GI3 561 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 TTC19Q6DKK2 380 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 B4GALNT4Q76KP1 1039 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 SPATS2Q86XZ4 545 aaKnown RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 NT5DC4Q86YG4 428 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 ZNF668Q96K58 619 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 MCEEQ96PE7 176 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 TRAIPQ9BWF2 469 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 VRTNQ9H8Y1 702 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 PLXNB2O15031 1838 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 A0A087WZ62 844 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 LACTBL1A8MY62 500 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 GPR25O00155 361 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 NDC80O14777 642 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 CD19P15391 556 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 MAGOHP61326 146 aaKnown RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 PPP1R15BQ5SWA1 713 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 TMEM63BQ5T3F8 832 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 ZFYVE27Q5T4F4 411 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 FOXR1Q6PIV2 292 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 ANKRD23Q86SG2 305 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 SRLQ86TD4 932 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 CEP120Q8N960 986 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 AFG1LQ8WV93 481 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 RNF25Q96BH1 459 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 FDXACB1Q9BRP7 624 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 HEMGNQ9BXL5 484 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 ROPN1BQ9BZX4 212 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 PDZD7Q9H5P4 517 aa19.6■□□□□ 0.73
CLN8-211ENST00000636934 ROPN1Q9HAT0 212 aaPredicted RBP19.6■□□□□ 0.73
CLN8-211ENST00000636934 RIPK2O43353 540 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 KRT1P04264 644 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 GJC1P36383 396 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 ADCY8P40145 1251 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 RPL7AP62424 266 aaKnown RBP19.59■□□□□ 0.73
CLN8-211ENST00000636934 SLC29A2Q14542 456 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 AMHR2Q16671 573 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 SCARA3Q6AZY7 606 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 MAMDC4Q6UXC1 1216 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 ATG4AQ8WYN0 398 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 TFAP2BQ92481 460 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 FOXP3Q9BZS1 431 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 SEMA4AQ9H3S1 761 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 POLIQ9UNA4 740 aa19.59■□□□□ 0.73
CLN8-211ENST00000636934 RRP15Q9Y3B9 282 aaKnown RBP19.59■□□□□ 0.73
CLN8-211ENST00000636934 CCL15-CCL14A0A0B4J2E2 113 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 RGS16O15492 202 aaPredicted RBP19.58■□□□□ 0.73
CLN8-211ENST00000636934 AGTP01019 485 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 NFICP08651 508 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 CCT5P48643 541 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 LLGL1Q15334 1064 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 CCL15Q16663 113 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 WDR72Q3MJ13 1102 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 JADE1Q6IE81 842 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 DRICH1Q6PGQ1 229 aaPredicted RBP19.58■□□□□ 0.73
CLN8-211ENST00000636934 RHBDF2Q6PJF5 856 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 MTHFD1LQ6UB35 978 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 POLNQ7Z5Q5 900 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 CDR2LQ86X02 465 aaPredicted RBP19.58■□□□□ 0.73
CLN8-211ENST00000636934 C1orf127Q8N9H9 656 aa19.58■□□□□ 0.73
CLN8-211ENST00000636934 SLITRK1Q96PX8 696 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms