RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 CDC25AP30304 524 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 TNFSF9P41273 254 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 MATR3P43243 847 aaKnown RBP eCLIP18.22■□□□□ 0.51
USE1-208ENST00000600970 GUCY2FP51841 1108 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 CYP4F8P98187 520 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 ITPRIPL2Q3MIP1 535 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 STPG1Q5TH74 334 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 TASP1Q9H6P5 420 aa18.22■□□□□ 0.51
USE1-208ENST00000600970 NOL7Q9UMY1 257 aaKnown RBP18.22■□□□□ 0.51
USE1-208ENST00000600970 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.22■□□□□ 0.51
USE1-208ENST00000600970 LACTBL1A8MY62 500 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 PPEF2O14830 753 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 PLS3P13797 630 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 MCM2P49736 904 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 RAD51AP2Q09MP3 1159 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 IL17AQ16552 155 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 PLA2G2CQ5R387 149 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 FBXO18Q8NFZ0 1043 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 MMTAG2Q9BU76 263 aaKnown RBP18.21■□□□□ 0.51
USE1-208ENST00000600970 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 HSFX1Q9UBD0 423 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 DENND4CQ5VZ89 1909 aa18.21■□□□□ 0.51
USE1-208ENST00000600970 SPAG17Q6Q759 2223 aa18.21■□□□□ 0.5
USE1-208ENST00000600970 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
USE1-208ENST00000600970 CCDC192P0DO97 292 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 TOB1P50616 345 aaPredicted RBP18.2■□□□□ 0.5
USE1-208ENST00000600970 SMTNP53814 917 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 LILRA4P59901 499 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
USE1-208ENST00000600970 PTPAQ15257 358 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 TMEM196Q5HYL7 178 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 FSTL4Q6MZW2 842 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 ARMCX5Q6P1M9 558 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 CCDC83Q8IWF9 413 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 SLC46A2Q9BY10 475 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 SMG9Q9H0W8 520 aaKnown RBP18.2■□□□□ 0.5
USE1-208ENST00000600970 SMOC1Q9H4F8 434 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 GKN1Q9NS71 199 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 THG1LQ9NWX6 298 aaKnown RBP18.2■□□□□ 0.5
USE1-208ENST00000600970 KCNG1Q9UIX4 513 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 SLC8A2Q9UPR5 921 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 PCDHB6Q9Y5E3 794 aa18.2■□□□□ 0.5
USE1-208ENST00000600970 ODC1P11926 461 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 ATF6P18850 670 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 CDC25CP30307 473 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 ENOX2Q16206 610 aaKnown RBP18.19■□□□□ 0.5
USE1-208ENST00000600970 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 OR10T2Q8NGX3 314 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 CHFRQ96EP1 664 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 ZC3H10Q96K80 434 aaKnown RBP18.19■□□□□ 0.5
USE1-208ENST00000600970 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 SEPT5Q99719 369 aaPredicted RBP18.19■□□□□ 0.5
USE1-208ENST00000600970 FAM83CQ9BQN1 747 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 LSM14BQ9BX40 385 aaKnown RBP18.19■□□□□ 0.5
USE1-208ENST00000600970 HPS4Q9NQG7 708 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 RALYQ9UKM9 306 aaKnown RBP18.19■□□□□ 0.5
USE1-208ENST00000600970 PCDHGA5Q9Y5G8 931 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 USP24Q9UPU5 2620 aa18.19■□□□□ 0.5
USE1-208ENST00000600970 FAM189A1O60320 539 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 ATG13O75143 517 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 AKAP3O75969 853 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 KCNK5O95279 499 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 ADRB2P07550 413 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 MPLP40238 635 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 TUFMP49411 452 aaKnown RBP18.18■□□□□ 0.5
USE1-208ENST00000600970 CDR1P51861 262 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 GRSF1Q12849 480 aaKnown RBP eCLIP18.18■□□□□ 0.5
USE1-208ENST00000600970 RUNX3Q13761 415 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 VEPH1Q14D04 833 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 MGAT5BQ3V5L5 792 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 SLC39A12Q504Y0 691 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 SYT2Q8N9I0 419 aaPredicted RBP18.18■□□□□ 0.5
USE1-208ENST00000600970 BICD1Q96G01 975 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 ZCWPW1Q9H0M4 648 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 POLR3BQ9NW08 1133 aaPredicted RBP18.18■□□□□ 0.5
USE1-208ENST00000600970 ZNF638Q14966 1978 aaKnown RBP18.18■□□□□ 0.5
USE1-208ENST00000600970 OBSL1O75147 1896 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 ATG2BQ96BY7 2078 aa18.18■□□□□ 0.5
USE1-208ENST00000600970 OTOL1A6NHN0 477 aaPredicted RBP18.17■□□□□ 0.5
USE1-208ENST00000600970 TRDMT1O14717 391 aaKnown RBP18.17■□□□□ 0.5
USE1-208ENST00000600970 CYP11A1P05108 521 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 U2AF2P26368 475 aaKnown RBP eCLIP18.17■□□□□ 0.5
USE1-208ENST00000600970 PRPHP41219 470 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 NCKAP1LP55160 1127 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 ZRSR1Q15695 479 aaKnown RBP18.17■□□□□ 0.5
USE1-208ENST00000600970 KYAT1Q16773 422 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 TRIM68Q6AZZ1 485 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 JADE1Q6IE81 842 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 CMTM8Q8IZV2 173 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 CAMKK1Q8N5S9 505 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 GIPC2Q8TF65 315 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 TSPAN18Q96SJ8 248 aa18.17■□□□□ 0.5
USE1-208ENST00000600970 LLPHQ9BRT6 129 aaKnown RBP18.17■□□□□ 0.5
USE1-208ENST00000600970 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms