RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TLCD1Q96CP7 247 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 FAXDC2Q96IV6 333 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 OSBPL8Q9BZF1 889 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 SDCBP2Q9H190 292 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 SLC12A6Q9UHW9 1150 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 NEU2Q9Y3R4 380 aa16.7■□□□□ 0.26
MBD1-227ENST00000592060 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 ZEB2O60315 1214 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 SNAI1O95863 264 aaPredicted RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 TCF4P15884 667 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 IVDP26440 423 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 RAP1GAPP47736 663 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 GUCY1A3Q02108 690 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 DENND2CQ68D51 928 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 JADE1Q6IE81 842 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 DENND1BQ6P3S1 775 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 GRK7Q8WTQ7 553 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 BRI3BPQ8WY22 251 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 MCEEQ96PE7 176 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 NXF1Q9UBU9 619 aaKnown RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 ZNF236Q9UL36 1845 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 VTNP04004 478 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 HPDP32754 393 aaPredicted RBP16.69■□□□□ 0.26
MBD1-227ENST00000592060 LSP1P33241 339 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 TAP1Q03518 808 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 IFFO1Q0D2I5 559 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 CCNG2Q16589 344 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 CCL15Q16663 113 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 ZNF667Q5HYK9 610 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 LRRC38Q5VT99 294 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 MTHFD1LQ6UB35 978 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 NIPA2Q8N8Q9 360 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 CPB2Q96IY4 423 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 PPP1R16BQ96T49 567 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 HEMGNQ9BXL5 484 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 AAASQ9NRG9 546 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 HOMER3Q9NSC5 361 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 AKT3Q9Y243 479 aa16.69■□□□□ 0.26
MBD1-227ENST00000592060 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 CITO14578 2027 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 STRNO43815 780 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 KRT19P08727 400 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 PAEPP09466 180 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 HOXD8P13378 290 aaPredicted RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 RARGP13631 454 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ARF4P18085 180 aaPredicted RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 GJC1P36383 396 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 GCLCP48506 637 aaPredicted RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 GTF2A2P52657 109 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 RAD23BP54727 409 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 CALCOCO2Q13137 446 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 PTPN20Q4JDL3 420 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ANKRD23Q86SG2 305 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ERICH1Q86X53 443 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 BCAS4Q8TDM0 211 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 SNF8Q96H20 258 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 SLITRK1Q96PX8 696 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 LHX5Q9H2C1 402 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 VRTNQ9H8Y1 702 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 CYTH4Q9UIA0 394 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 NOVA2Q9UNW9 492 aaKnown RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 SRRM3A6NNA2 597 aaPredicted RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 RIPK2O43353 540 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ITGB3P05106 788 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 LACTBP83111 547 aaPredicted RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 NFX1Q12986 1120 aaKnown RBP16.68■□□□□ 0.26
MBD1-227ENST00000592060 SLC29A2Q14542 456 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 PTGISQ16647 500 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 SLC10A6Q3KNW5 377 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 CYP4A22Q5TCH4 519 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ATL2Q8NHH9 583 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 TMEM109Q9BVC6 243 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 ASB7Q9H672 318 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 SMYD3Q9H7B4 428 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 BCCIPQ9P287 314 aaKnown RBP eCLIP16.68■□□□□ 0.26
MBD1-227ENST00000592060 ASIC3Q9UHC3 531 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 CEP83Q9Y592 693 aa16.68■□□□□ 0.26
MBD1-227ENST00000592060 F8VP50 259 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 CAND2O75155 1236 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 GAS8O95995 478 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 ITIH2P19823 946 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 FGFR4P22455 802 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
MBD1-227ENST00000592060 CDH8P55286 799 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 GSCP56915 257 aaPredicted RBP16.67■□□□□ 0.26
MBD1-227ENST00000592060 PPP2R2AP63151 447 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 GRB14Q14449 540 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 ATP13A4Q4VNC1 1196 aa16.67■□□□□ 0.26
MBD1-227ENST00000592060 PNMA8AQ86V59 439 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms