RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 TLR9Q9NR96 1032 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.02□□□□□ -0.33
DNMT1-218ENST00000589294 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 BACE2Q9Y5Z0 518 aa13.02□□□□□ -0.33
DNMT1-218ENST00000589294 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 OR6C75A6NL08 312 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 SOX1O00570 391 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 FSCN2O14926 492 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 AP5Z1O43299 807 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 NOL4O94818 638 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 C1RP00736 705 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 URODP06132 367 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 WEE2P0C1S8 567 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 UCHL3P15374 230 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 CDH8P55286 799 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 INCA1Q0VD86 236 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 CAMK1Q14012 370 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 SMC1AQ14683 1233 aaKnown RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 PTPROQ16827 1216 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 FIGNQ5HY92 759 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 RTP2Q5QGT7 225 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 RRAGAQ7L523 313 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 ARHGEF19Q8IW93 802 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 KBTBD7Q8WVZ9 684 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 ELMO3Q96BJ8 720 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 STK33Q9BYT3 514 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 TTYH1Q9H313 450 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 SMYD3Q9H7B4 428 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 CISHQ9NSE2 258 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 DNAJC12Q9UKB3 198 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 STXBP5LQ9Y2K9 1186 aa13.01□□□□□ -0.33
DNMT1-218ENST00000589294 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
DNMT1-218ENST00000589294 LPXNO60711 386 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 TRIM21P19474 475 aaKnown RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 POU3F3P20264 500 aaPredicted RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 PCSK1P29120 753 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 KLK7P49862 253 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 PTPN14Q15678 1187 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF697Q5TEC3 545 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF280DQ6N043 979 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 OR6B3Q8NGW1 331 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 MRPL38Q96DV4 380 aaKnown RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 MRFAP1L1Q96HT8 127 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 B3GALT6Q96L58 329 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 KREMEN1Q96MU8 473 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 MRPL45Q9BRJ2 306 aaKnown RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 EMILIN2Q9BXX0 1053 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 SDCBP2Q9H190 292 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 GANQ9H2C0 597 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 FAM207AQ9NSI2 230 aaPredicted RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 DDX43Q9NXZ2 648 aaKnown RBP13□□□□□ -0.33
DNMT1-218ENST00000589294 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 CNTN6Q9UQ52 1028 aa13□□□□□ -0.33
DNMT1-218ENST00000589294 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13□□□□□ -0.33
DNMT1-218ENST00000589294 KIAA1671Q9BY89 1806 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 ITIH6Q6UXX5 1313 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 C2orf71A6NGG8 1288 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 EPOPA6NHQ4 379 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 A8MXQ7 604 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 CILPO75339 1184 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 ACO1P21399 889 aaKnown RBP12.99□□□□□ -0.33
DNMT1-218ENST00000589294 LMO2P25791 158 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF75DP51815 510 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 POLR2FP61218 127 aaKnown RBP12.99□□□□□ -0.33
DNMT1-218ENST00000589294 APBA1Q02410 837 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 SMARCB1Q12824 385 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 GSE1Q14687 1217 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 PSMD5Q16401 504 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 SPECC1LQ69YQ0 1117 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 IQCEQ6IPM2 695 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 SLC8B1Q6J4K2 584 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 UBR7Q8N806 425 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 SHC3Q92529 594 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 LRCH3Q96II8 777 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 TNIP3Q96KP6 325 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 ARID3AQ99856 593 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 RTP3Q9BQQ7 232 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 CLSTN3Q9BQT9 956 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 NT5C1AQ9BXI3 368 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 CEP72Q9P209 647 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 CDH9Q9ULB4 789 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
DNMT1-218ENST00000589294 A0A1W2PQJ5 194 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 RFXAPO00287 272 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms