RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TM6SF1Q9BZW5 370 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 IL21Q9HBE4 155 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 GKN1Q9NS71 199 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 OBP2AQ9NY56 170 aa19.74■□□□□ 0.75
TOP3A-220ENST00000585031 PTPRDP23468 1912 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 LNP1A1A4G5 178 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 DPYSL4O14531 572 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 RNF40O75150 1001 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 CAVIN2O95810 425 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 GABRR2P28476 465 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 MCM7P33993 719 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 NPTX2P47972 431 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 FOSBP53539 338 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 SPAG1Q07617 926 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 GPR17Q13304 367 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 TRIM68Q6AZZ1 485 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 RIN3Q8TB24 985 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 EZH1Q92800 747 aaPredicted RBP19.73■□□□□ 0.75
TOP3A-220ENST00000585031 PSMG2Q969U7 264 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 FAM83CQ9BQN1 747 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 SLC8A2Q9UPR5 921 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 TSC2P49815 1807 aa19.73■□□□□ 0.75
TOP3A-220ENST00000585031 GON4LQ3T8J9 2241 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 CELSR3Q9NYQ7 3312 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 BCLAF3A2AJT9 711 aaKnown RBP19.72■□□□□ 0.75
TOP3A-220ENST00000585031 MTMR11A4FU01 709 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 CDX4O14627 284 aaPredicted RBP19.72■□□□□ 0.75
TOP3A-220ENST00000585031 MCF2P10911 925 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 HARSP12081 509 aaKnown RBP19.72■□□□□ 0.75
TOP3A-220ENST00000585031 U2AF2P26368 475 aaKnown RBP eCLIP19.72■□□□□ 0.75
TOP3A-220ENST00000585031 PEX3P56589 373 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 CREB5Q02930 508 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 YWHAHQ04917 246 aaPredicted RBP19.72■□□□□ 0.75
TOP3A-220ENST00000585031 LPIN3Q9BQK8 851 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 SLC46A2Q9BY10 475 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 BHMT2Q9H2M3 363 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 CCL26Q9Y258 94 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 INVSQ9Y283 1065 aa19.72■□□□□ 0.75
TOP3A-220ENST00000585031 CCDC169A6NNP5 214 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 PATE3B3GLJ2 98 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 TRDMT1O14717 391 aaKnown RBP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 ATG13O75143 517 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 MARCKSP29966 332 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 WEE1P30291 646 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 AARSP49588 968 aaKnown RBP eCLIP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 GUCY2FP51841 1108 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 C8orf34Q49A92 452 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 HAUS6Q7Z4H7 955 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 APBB1IPQ7Z5R6 666 aaPredicted RBP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 DIS3L2Q8IYB7 885 aaKnown RBP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 NECAB1Q8N987 351 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 KIFAP3Q92845 792 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 MRPL4Q9BYD3 311 aaKnown RBP19.71■□□□□ 0.75
TOP3A-220ENST00000585031 HAPLN2Q9GZV7 340 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 EBF3Q9H4W6 596 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 TASP1Q9H6P5 420 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 ARHGAP28Q9P2N2 729 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 PHLPP2Q6ZVD8 1323 aa19.71■□□□□ 0.75
TOP3A-220ENST00000585031 PI4KAP42356 2102 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 IGSF10Q6WRI0 2623 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 PPEF2O14830 753 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 LARGE1O95461 756 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 ARSAP15289 507 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 ALDH1A3P47895 512 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 PLCB2Q00722 1185 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 PLD1Q13393 1074 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 MPZL3Q6UWV2 235 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 TMEM134Q9H6X4 195 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 NEUROG3Q9Y4Z2 214 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 MYH11P35749 1972 aa19.7■□□□□ 0.74
TOP3A-220ENST00000585031 SCN1AP35498 2009 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 ANTXRLA6NF34 631 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 RHOBTB1O94844 696 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 REC8O95072 547 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 CAPNS1P04632 268 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 MCM2P49736 904 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 GALK1P51570 392 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 GRSF1Q12849 480 aaKnown RBP eCLIP19.69■□□□□ 0.74
TOP3A-220ENST00000585031 MAPK7Q13164 816 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 RUNX3Q13761 415 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 ELF2Q15723 593 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 ZBTB6Q15916 424 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 TMEM150AQ86TG1 271 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 TCHPQ9BT92 498 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 MSRB2Q9Y3D2 182 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 ASB3Q9Y575 518 aa19.69■□□□□ 0.74
TOP3A-220ENST00000585031 TNRC6BQ9UPQ9 1833 aaKnown RBP19.68■□□□□ 0.74
TOP3A-220ENST00000585031 ATF6P18850 670 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 LRPAP1P30533 357 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 ANP32AP39687 249 aaKnown RBP19.68■□□□□ 0.74
TOP3A-220ENST00000585031 SOWAHCQ53LP3 525 aaPredicted RBP19.68■□□□□ 0.74
TOP3A-220ENST00000585031 KIAA1211LQ6NV74 962 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 BRMS1Q9HCU9 246 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 TMEM9BQ9NQ34 198 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 BPTFQ12830 3046 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 ADAMTS20P59510 1910 aa19.68■□□□□ 0.74
TOP3A-220ENST00000585031 ADAMTS9Q9P2N4 1935 aa19.67■□□□□ 0.74
TOP3A-220ENST00000585031 OR6C75A6NL08 312 aa19.67■□□□□ 0.74
TOP3A-220ENST00000585031 SFI1A8K8P3 1242 aa19.67■□□□□ 0.74
TOP3A-220ENST00000585031 HIP1RO75146 1068 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms