RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 BPIFB4P59827 614 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 ERVFC1P60507 584 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 GPR17Q13304 367 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CUL2Q13617 745 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CAMK1Q14012 370 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 GRIN2CQ14957 1233 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 STILQ15468 1287 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 PSMD5Q16401 504 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 WSCD1Q658N2 575 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 TMEM184AQ6ZMB5 413 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CEP57Q86XR8 500 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 ZNF461Q8TAF7 563 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 SEMA4DQ92854 862 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 FUBP3Q96I24 572 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBBP4-201ENST00000583708 VN1R3Q9BXE9 311 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 RHOBTB2Q9BYZ6 727 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 PLEKHA4Q9H4M7 779 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 TLE6Q9H808 572 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 MMRN2Q9H8L6 949 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 ABCB6Q9NP58 842 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 TAB2Q9NYJ8 693 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
UBBP4-201ENST00000583708 MTUS1Q9ULD2 1270 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 L1RE1Q9UN81 338 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 CNTN6Q9UQ52 1028 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 STXBP5LQ9Y2K9 1186 aa9.96□□□□□ -0.82
UBBP4-201ENST00000583708 SOX1O00570 391 aaPredicted RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 ABLIM3O94929 683 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 POU2F2P09086 479 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 PAEPP09466 180 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 ATP1A3P13637 1013 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 HOXB8P17481 243 aaPredicted RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 TKTP29401 623 aaKnown RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 ASPAP45381 313 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 TUFMP49411 452 aaKnown RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 FXR1P51114 621 aaKnown RBP eCLIP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 MEA1Q16626 185 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 KLHDC7AQ5VTJ3 777 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 C4orf50Q6ZRC1 276 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 CCDC149Q6ZUS6 474 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 TAS1R1Q7RTX1 841 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 PPM1KQ8N3J5 372 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 DEFB123Q8N688 67 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 NEK11Q8NG66 645 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 HASPINQ8TF76 798 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 KLHL5Q96PQ7 755 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 NT5C1AQ9BXI3 368 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 STK33Q9BYT3 514 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 UBE2TQ9NPD8 197 aaPredicted RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 DZANK1Q9NVP4 752 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 DDX43Q9NXZ2 648 aaKnown RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 AFF4Q9UHB7 1163 aaKnown RBP9.95□□□□□ -0.82
UBBP4-201ENST00000583708 SIK3Q9Y2K2 1263 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.95□□□□□ -0.829e-9■□□□□ 11.1
UBBP4-201ENST00000583708 MTCH2Q9Y6C9 303 aa9.95□□□□□ -0.82
UBBP4-201ENST00000583708 TRANK1O15050 2925 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ATP8B3O60423 1300 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ITIH6Q6UXX5 1313 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
UBBP4-201ENST00000583708 A8MXQ7 604 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CILPO75339 1184 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 PAPLNO95428 1278 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CNPP09543 421 aaKnown RBP9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ATF2P15336 505 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 SLC9A1P19634 815 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 DNAJB1P25685 340 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 KLRC2P26717 231 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 HOXA9P31269 272 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ELF1P32519 619 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 KCNMA1Q12791 1236 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 PLD1Q13393 1074 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 TRIM14Q14142 442 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 COL19A1Q14993 1142 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 SYCP1Q15431 976 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 DUSP6Q16828 381 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 HSP90AA4PQ58FG1 418 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 INTS6LQ5JSJ4 861 aaKnown RBP9.94□□□□□ -0.82
UBBP4-201ENST00000583708 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 FAM171BQ6P995 826 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 LILRA6Q6PI73 481 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 TCEAL8Q8IYN2 117 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 EFHBQ8N7U6 833 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ZNF397Q8NF99 534 aaPredicted RBP9.94□□□□□ -0.82
UBBP4-201ENST00000583708 OR6B3Q8NGW1 331 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 MYCBPAPQ8TBZ2 947 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 SPPL2BQ8TCT7 592 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 KBTBD7Q8WVZ9 684 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 SHC3Q92529 594 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 RABGGTAQ92696 567 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CASP10Q92851 521 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 TATDN2Q93075 761 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CLSTN3Q9BQT9 956 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 ZCWPW1Q9H0M4 648 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 PRDM12Q9H4Q4 367 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CERS4Q9HA82 394 aa9.94□□□□□ -0.82
UBBP4-201ENST00000583708 CISHQ9NSE2 258 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms