RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MED24O75448 989 aa10.72□□□□□ -0.69
MSI2-209ENST00000579483 UBA1P22314 1058 aaKnown RBP10.72□□□□□ -0.69
MSI2-209ENST00000579483 EIF3EP60228 445 aaKnown RBP10.72□□□□□ -0.69
MSI2-209ENST00000579483 TWF1Q12792 350 aa10.72□□□□□ -0.69
MSI2-209ENST00000579483 TRIP13Q15645 432 aaPredicted RBP10.72□□□□□ -0.69
MSI2-209ENST00000579483 TBCCQ15814 346 aa10.72□□□□□ -0.69
MSI2-209ENST00000579483 ZNF467Q7Z7K2 595 aaPredicted RBP10.72□□□□□ -0.69
MSI2-209ENST00000579483 CHGBP05060 677 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 ADCY2Q08462 1091 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 NSUN2Q08J23 767 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSI2-209ENST00000579483 LLGL1Q15334 1064 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 BTNL9Q6UXG8 535 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 MMS22LQ6ZRQ5 1243 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 ZFPM1Q8IX07 1006 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 UHMK1Q8TAS1 419 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 CD99L2Q8TCZ2 262 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 RAPGEF5Q92565 580 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 LRGUKQ96M69 825 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 SYT15Q9BQS2 421 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 TSEN34Q9BSV6 310 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 SARS2Q9NP81 518 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 IL17RBQ9NRM6 502 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 MRC1P22897 1456 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 SF3B1O75533 1304 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSI2-209ENST00000579483 RASGRF2O14827 1237 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 TLL1O43897 1013 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 PGK1P00558 417 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 ASS1P00966 412 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 RGS4P49798 205 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 MTFR1Q15390 333 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 IMPG1Q17R60 797 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 C6orf118Q5T5N4 469 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 METTL16Q86W50 562 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSI2-209ENST00000579483 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 CELF4Q9BZC1 486 aaKnown RBP10.71□□□□□ -0.69
MSI2-209ENST00000579483 SAYSD1Q9NPB0 183 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 DDIT4Q9NX09 232 aa10.71□□□□□ -0.69
MSI2-209ENST00000579483 MOXD2PA6NHM9 499 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 GFPT1Q06210 699 aaPredicted RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 DUSP28Q4G0W2 176 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 TIGD7Q6NT04 549 aaPredicted RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 TRIM48Q8IWZ4 208 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 ENGASEQ8NFI3 743 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 DDI1Q8WTU0 396 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 INTS9Q9NV88 658 aaKnown RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 NRBP1Q9UHY1 535 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 PKP3Q9Y446 797 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 DUSP11O75319 330 aaKnown RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 EIF4BP23588 611 aaKnown RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 GRB10Q13322 594 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 PKN2Q16513 984 aaKnown RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 RETSATQ6NUM9 610 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 DDX42Q86XP3 938 aaKnown RBP eCLIP10.71□□□□□ -0.7
MSI2-209ENST00000579483 TTC30BQ8N4P2 665 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 CYFIP2Q96F07 1278 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 CPB2Q96IY4 423 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 CNOT10Q9H9A5 744 aaKnown RBP10.71□□□□□ -0.7
MSI2-209ENST00000579483 NCKAP1Q9Y2A7 1128 aa10.71□□□□□ -0.7
MSI2-209ENST00000579483 COL1A2P08123 1366 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 TRIM66O15016 1216 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 ANXA9O76027 345 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 FGF19O95750 216 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 POMCP01189 267 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SMIM10L2AP0DMW4 78 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SMIM10L2BP0DMW5 78 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 FDPSP14324 419 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 RARRES1P49788 294 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 PRKCQQ04759 706 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 MFN1Q8IWA4 741 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SRPK1Q96SB4 655 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 GPR63Q9BZJ6 419 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 HIPK3Q9H422 1215 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 TMEM134Q9H6X4 195 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 VCX3AQ9NNX9 186 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 TTC26A0AVF1 554 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 CASTOR2A6NHX0 329 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SMIM24O75264 130 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 PYGLP06737 847 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 CRYBB1P53674 252 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 SLC18A3Q16572 532 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 CDR2LQ86X02 465 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 SPATS2Q86XZ4 545 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 SYN2Q92777 582 aaPredicted RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 CLMNQ96JQ2 1002 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 TUBB6Q9BUF5 446 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 CDY2AQ9Y6F7 541 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 NDUFS3O75489 264 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 LAG3P18627 525 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 BST2Q10589 180 aaKnown RBP10.7□□□□□ -0.7
MSI2-209ENST00000579483 ZNF720Q7Z2F6 126 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 LINC00523Q86TU6 105 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 ATP11CQ8NB49 1132 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 PDZD8Q8NEN9 1154 aa10.7□□□□□ -0.7
MSI2-209ENST00000579483 CDC26Q8NHZ8 85 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms