RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 ELAC2Q9BQ52 826 aaKnown RBP9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CISHQ9NSE2 258 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 POLIQ9UNA4 740 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 GINS2Q9Y248 185 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 IVNS1ABPQ9Y6Y0 642 aa9.28□□□□□ -0.92
LINC00558-201ENST00000569422 CNTNAP2Q9UHC6 1331 aa9.27□□□□□ -0.92
LINC00558-201ENST00000569422 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 PRKCBP05771 671 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 NUDT17P0C025 328 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 NAT2P11245 290 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 AUHQ13825 339 aaKnown RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 MAPK6Q16659 721 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 SYCP2LQ5T4T6 812 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 FAM160B1Q5W0V3 765 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 LBX2Q6XYB7 198 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 CACNA2D3Q8IZS8 1091 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 RSPH1Q8WYR4 309 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 ARHGEF2Q92974 986 aaKnown RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 TLCD1Q96CP7 247 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 SNF8Q96H20 258 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 FHDC1Q9C0D6 1143 aaPredicted RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 MRPL47Q9HD33 250 aaKnown RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 KIF1CO43896 1103 aaKnown RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 ABCD1P33897 745 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 TCEAL1Q15170 157 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 CYP1B1Q16678 543 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 P3H1Q32P28 736 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 Q3C1V9 767 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 GKAP1Q5VSY0 366 aaPredicted RBP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 IZUMO3Q5VZ72 239 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 DNAJC24Q6P3W2 148 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 MFSD7Q6UXD7 560 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 LRRC34Q8IZ02 419 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 CHST13Q8NET6 341 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 CHMP6Q96FZ7 201 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 SPATA33Q96N06 139 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 SYNCQ9H7C4 482 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 PDGFCQ9NRA1 345 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00558-201ENST00000569422 DOCK5Q9H7D0 1870 aa9.27□□□□□ -0.93
LINC00558-201ENST00000569422 STAM2O75886 525 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 SLC1A1P43005 524 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 NEDD9Q14511 834 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 WDR72Q3MJ13 1102 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 EEF1DP3Q658K8 133 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ZNF677Q86XU0 584 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 EMC1Q8N766 993 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 DNERQ8NFT8 737 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TFAP2BQ92481 460 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TRIM11Q96F44 468 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 FAM81BQ96LP2 452 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 MRPL4Q9BYD3 311 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 CXorf56Q9H5V9 222 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TXNRD2Q9NNW7 524 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 RNF19AQ9NV58 838 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 PARVAQ9NVD7 372 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 PCSK1NQ9UHG2 260 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 DNPEPQ9ULA0 475 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TNS1Q9HBL0 1735 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TP73O15350 636 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TOM1L1O75674 476 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ATG7O95352 703 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 CXCL8P10145 99 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 MYBL1P10243 752 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 DUOXA2Q1HG44 320 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 EMC10Q5UCC4 262 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 EXOC3L1Q86VI1 746 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ERICH1Q86X53 443 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ZBTB8OSQ8IWT0 167 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 SULF1Q8IWU6 871 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 THOC1Q96FV9 657 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 AVENQ9NQS1 362 aaPredicted RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 POC1B-GALNT4F8VUJ3 575 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 MSCO60682 206 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ITIH2P19823 946 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TBXAS1P24557 533 aaPredicted RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 OGDHQ02218 1023 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ERMARDQ5T6L9 678 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 SRRM1Q8IYB3 904 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TMEM121Q9BTD3 319 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ASCC2Q9H1I8 757 aaPredicted RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 ADAM7Q9H2U9 754 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 CNOT10Q9H9A5 744 aaKnown RBP9.26□□□□□ -0.93
LINC00558-201ENST00000569422 SUN2Q9UH99 717 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 AGTPBP1Q9UPW5 1226 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 STYXL1Q9Y6J8 313 aa9.26□□□□□ -0.93
LINC00558-201ENST00000569422 TMEM120BA0PK00 339 aa9.25□□□□□ -0.93
LINC00558-201ENST00000569422 MAFO75444 373 aaPredicted RBP9.25□□□□□ -0.93
LINC00558-201ENST00000569422 BANF1O75531 89 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms