RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 ZBTB33Q86T24 672 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 KLHDC9Q8NEP7 349 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 ZNF606Q8WXB4 792 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 CYFIP2Q96F07 1278 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 GDAP1L1Q96MZ0 367 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 ZIM3Q96PE6 472 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 RRN3P2A6NIE6 340 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 HAS3O00219 553 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 EDN1P05305 212 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 PAEPP09466 180 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 CDH5P33151 784 aaPredicted RBP18.78■□□□□ 0.6
NEIL1-221ENST00000569035 LMAN1P49257 510 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 KCNA10Q16322 511 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 MARCH8Q5T0T0 291 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 ARFGAP2Q8N6H7 521 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 FMO2Q99518 471 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 VRTNQ9H8Y1 702 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 CYP3A43Q9HB55 503 aa18.78■□□□□ 0.6
NEIL1-221ENST00000569035 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■■■■ 149.1
NEIL1-221ENST00000569035 ESYT3A0FGR9 886 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 NDC80O14777 642 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 KPNA6O60684 536 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 CLCN3P51790 818 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 WNT7BP56706 349 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 PTPROQ16827 1216 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 ZBTB41Q5SVQ8 909 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 EMC10Q5UCC4 262 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 LRRC38Q5VT99 294 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 JAMLQ86YT9 394 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 TSEN2Q8NCE0 465 aaKnown RBP18.77■□□□□ 0.6
NEIL1-221ENST00000569035 KRT35Q92764 455 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 ADPGKQ9BRR6 497 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 MTG1Q9BT17 334 aaPredicted RBP18.77■□□□□ 0.6
NEIL1-221ENST00000569035 MTMR12Q9C0I1 747 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 ACP6Q9NPH0 428 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 CALCOCO1Q9P1Z2 691 aa18.77■□□□□ 0.6
NEIL1-221ENST00000569035 ANK1P16157 1881 aa18.77■□□□□ 0.59
NEIL1-221ENST00000569035 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ASGR1P07306 291 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 GJB1P08034 283 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CAPN2P17655 700 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 MMP8P22894 467 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 RRM1P23921 792 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ECHS1P30084 290 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ACTN2P35609 894 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 TNFSF9P41273 254 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ZNF211Q13398 564 aaPredicted RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 HIC1Q14526 733 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ZNF667Q5HYK9 610 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CCDC137Q6PK04 289 aaKnown RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 MTHFD1LQ6UB35 978 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CEP128Q6ZU80 1094 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 TNS4Q8IZW8 715 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 FEZF2Q8TBJ5 459 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CPA5Q8WXQ8 436 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 KATNAL1Q9BW62 490 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 MIS12Q9H081 205 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CDT1Q9H211 546 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 LHX5Q9H2C1 402 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CISHQ9NSE2 258 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 MROH7Q68CQ1 1323 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 DAPK3O43293 454 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 ATMINO43313 823 aaPredicted RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 STAU1O95793 577 aaKnown RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 PYGMP11217 842 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 GUCY2FP51841 1108 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 MRPS25P82663 173 aaKnown RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
NEIL1-221ENST00000569035 CAV1Q03135 178 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 LMNB2Q03252 620 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 SLMAPQ14BN4 828 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 RNF180Q86T96 592 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 PRELID2Q8N945 189 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 UNC93B1Q9H1C4 597 aa18.76■□□□□ 0.59
NEIL1-221ENST00000569035 NRCAMQ92823 1304 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 FAM153BP0C7A2 387 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 COILP38432 576 aaPredicted RBP18.75■□□□□ 0.59
NEIL1-221ENST00000569035 MYL6P60660 151 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 COPS2P61201 443 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 PIGHQ14442 188 aaPredicted RBP18.75■□□□□ 0.59
NEIL1-221ENST00000569035 MTFR1Q15390 333 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 FAM153CQ494X1 144 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 CCDC105Q8IYK2 499 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 THNSL1Q8IYQ7 743 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 BBOF1Q8ND07 529 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 EXD1Q8NHP7 514 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 FAM212AQ96EL1 285 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 RBM41Q96IZ5 413 aaKnown RBP18.75■□□□□ 0.59
NEIL1-221ENST00000569035 TSPAN18Q96SJ8 248 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.75■□□□□ 0.59
NEIL1-221ENST00000569035 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 FAM153AQ9UHL3 310 aa18.75■□□□□ 0.59
NEIL1-221ENST00000569035 C2CD2Q9Y426 696 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms