RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TARM1B6A8C7 271 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 KIAA0391O15091 583 aaKnown RBP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 NDUFS2O75306 463 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 HNRNPCP07910 306 aaKnown RBP eCLIP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 FCER1AP12319 257 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 GSPT1P15170 499 aaKnown RBP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 CCND1P24385 295 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 MPGP29372 298 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 CCT8P50990 548 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 PPP3CAQ08209 521 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 PTPN21Q16825 1174 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 BRDTQ58F21 947 aaPredicted RBP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 SLC18B1Q6NT16 456 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 MIGA2Q7L4E1 593 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 ZDHHC17Q8IUH5 632 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 CAMKK1Q8N5S9 505 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 MYCBPAPQ8TBZ2 947 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 JADE3Q92613 823 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 HOXB13Q92826 284 aaPredicted RBP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 MYOCQ99972 504 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 MANSC1Q9H8J5 431 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 TUBA8Q9NY65 449 aaPredicted RBP4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 NR2E3Q9Y5X4 410 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 ACTL7AQ9Y615 435 aa4.13□□□□□ -1.75
HDGFL3-202ENST00000562702 PRR23D1E9PI22 279 aaPredicted RBP4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 HAUS5O94927 633 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 LATS1O95835 1130 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 PRR23D2P0DMB1 279 aaPredicted RBP4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 CYP2D6P10635 497 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 GATA3P23771 443 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 NR4A2P43354 598 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 SLFN5Q08AF3 891 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 DYRK1AQ13627 763 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 MIDNQ504T8 468 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 EFCAB2Q5VUJ9 269 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 CEP85Q6P2H3 762 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 PPM1NQ8N819 430 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 PBKQ96KB5 322 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 TEKT5Q96M29 485 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 C7orf25Q9BPX7 421 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 TMEM79Q9BSE2 394 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 ALG8Q9BVK2 526 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 EBF3Q9H4W6 596 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 ZNF112Q9UJU3 913 aa4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 RUVBL1Q9Y265 456 aaKnown RBP4.12□□□□□ -1.75
HDGFL3-202ENST00000562702 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 TCRBV7S2A1N4TA0A589 114 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 FZD9O00144 591 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 WNT10BO00744 389 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 TOR1BO14657 336 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA12O60330 932 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 JTBO76095 146 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 SNUPNO95149 360 aaKnown RBP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 TUBB4AP04350 444 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 EBLN1P0CF75 366 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 FPR1P21462 350 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 C5AR1P21730 350 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 CCKARP32238 428 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 WASP42768 502 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 ANXA11P50995 505 aaKnown RBP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PIGFQ07326 219 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 HLXQ14774 488 aaPredicted RBP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCBP2Q15366 365 aaKnown RBP eCLIP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 CD300EQ496F6 205 aaPredicted RBP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 ZBTB46Q86UZ6 589 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 KRT73Q86Y46 540 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 SMRP1Q8NCR6 262 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 NRG4Q8WWG1 115 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 HDAC10Q969S8 669 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 CHMP4CQ96CF2 233 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 VPS16Q9H269 839 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 INTUQ9ULD6 942 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 CDYLQ9Y232 598 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA9Q9Y5G4 932 aaKnown RBP4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA8Q9Y5G5 932 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA7Q9Y5G6 932 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA6Q9Y5G7 932 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 PCDHGA3Q9Y5H0 932 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 TNKSO95271 1327 aa4.11□□□□□ -1.75
HDGFL3-202ENST00000562702 TOP3BO95985 862 aaKnown RBP4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 NR2F6P10588 404 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 PPP3CBP16298 524 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 DRD4P21917 467 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 RECQLP46063 649 aaPredicted RBP4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 KIF23Q02241 960 aaPredicted RBP4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 SEPT2Q15019 361 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 ADGRG5Q8IZF4 528 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 ADAMTS15Q8TE58 950 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 DDX56Q9NY93 547 aaKnown RBP4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 TUBD1Q9UJT1 453 aa4.1□□□□□ -1.75
HDGFL3-202ENST00000562702 CCDC195A0A1B0GUA6 201 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 WDR27A2RRH5 827 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 RPLP2P05387 115 aaKnown RBP4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 PDGFRBP09619 1106 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 NDUFB7P17568 137 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 PCSK1P29120 753 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 SLC6A9P48067 706 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 NEK2P51955 445 aa4.09□□□□□ -1.75
HDGFL3-202ENST00000562702 ADKP55263 362 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms