RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 MYBPC1Q00872 1141 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 DALRD3Q5D0E6 543 aaKnown RBP11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 MEI1Q5TIA1 1274 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 ITPRIPL1Q6GPH6 555 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM122CQ6P4D5 195 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 BTNL9Q6UXG8 535 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 KCTD20Q7Z5Y7 419 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 ADGRG6Q86SQ4 1221 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 RELL1Q8IUW5 271 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 BBOF1Q8ND07 529 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 ADAMTS16Q8TE57 1224 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 ARHGAP20Q9P2F6 1191 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 DNM3Q9UQ16 869 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 NEU2Q9Y3R4 380 aa11.58□□□□□ -0.56
SEMA4B-204ENST00000558065 PTGS2P35354 604 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 NR2C2P49116 596 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 SP140Q13342 867 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 NAALADL2Q58DX5 795 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 AAGABQ6PD74 315 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 CLNKQ7Z7G1 428 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 CPNE9Q8IYJ1 553 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PAF1Q8N7H5 531 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PCDH12Q9NPG4 1184 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ZDHHC18Q9NUE0 388 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 GABBR1Q9UBS5 961 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 WDR19Q8NEZ3 1342 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 RSPH10B2B2RC85 870 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 RSPH10BP0C881 870 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PTPN9P43378 593 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 NR1H2P55055 460 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 SNX32Q86XE0 403 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ZNF486Q96H40 463 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ZNF277Q9NRM2 450 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 SIRT5Q9NXA8 310 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ACAD8Q9UKU7 415 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ZCCHC11Q5TAX3 1644 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 DDX60Q8IY21 1712 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 LRRC72A6NJI9 287 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PCP4L1A6NKN8 68 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 FADS2P1A8MWK0 482 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 POLR1CO15160 346 aaPredicted RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 FTCDO95954 541 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 KLK7P49862 253 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 LPCAT4Q643R3 524 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 METTL2BQ6P1Q9 378 aaKnown RBP11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 LRRC6Q86X45 466 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM172AQ8WUF8 416 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 PANX3Q96QZ0 392 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 CCDC77Q9BR77 488 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 TRIM55Q9BYV6 548 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ATP13A3Q9H7F0 1226 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 SLC38A10Q9HBR0 1119 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 OLFML3Q9NRN5 406 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
SEMA4B-204ENST00000558065 NKX2-5P52952 324 aaPredicted RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 AP2B1P63010 937 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TAGLNQ01995 201 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 OXA1LQ15070 435 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 LRRC36Q1X8D7 754 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 AGMOQ6ZNB7 445 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 DCP2Q8IU60 420 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ANKRD42Q8N9B4 389 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TBC1D15Q8TC07 691 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TMIGD2Q96BF3 282 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ZNF274Q96GC6 653 aaPredicted RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 BOLA2Q9H3K6 86 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 SP140LQ9H930 580 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ECHDC1Q9NTX5 307 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TAS2R1Q9NYW7 299 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CNOT7Q9UIV1 285 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ZFP69BQ9UJL9 534 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 NCAPD2Q15021 1401 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TK2O00142 265 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 TNPO2O14787 897 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CALM1P0DP23 149 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CALM2P0DP24 149 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CALM3P0DP25 149 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 XIAPP98170 497 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 LSM12Q3MHD2 195 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 FAM205BPQ63HN1 556 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 KRT77Q7Z794 578 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 SCYL3Q8IZE3 742 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ANKRD53Q8N9V6 530 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 OSBP2Q969R2 916 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 ANKMY1Q9P2S6 941 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CHD1O14646 1710 aa11.56□□□□□ -0.56
SEMA4B-204ENST00000558065 CCDC194A0A1B0GVG4 234 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms