RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 KCNK5O95279 499 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 PLS3P13797 630 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 GJA1P17302 382 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 AVPR1AP37288 418 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 PRPHP41219 470 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 MATR3P43243 847 aaKnown RBP eCLIP11.09□□□□□ -0.63
RDH11-210ENST00000557331 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
RDH11-210ENST00000557331 POU5F1Q01860 360 aaKnown RBP11.09□□□□□ -0.63
RDH11-210ENST00000557331 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 RNF43Q68DV7 783 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 Q6ZS52 159 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 GAREM2Q75VX8 874 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 METTL23Q86XA0 190 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 FBXO18Q8NFZ0 1043 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 ACDQ96AP0 544 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 RBM12Q9NTZ6 932 aaKnown RBP11.09□□□□□ -0.63
RDH11-210ENST00000557331 ANKFY1Q9P2R3 1169 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 EBF1Q9UH73 591 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 DERAQ9Y315 318 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 ZFYVE26Q68DK2 2539 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 COL4A2P08572 1712 aa11.09□□□□□ -0.63
RDH11-210ENST00000557331 IGF2RP11717 2491 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 MTMR11A4FU01 709 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 NRG2O14511 850 aaPredicted RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 SLC16A4O15374 487 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 SLC26A4O43511 780 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 CYP11A1P05108 521 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 ADRB2P07550 413 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 MAPTP10636 758 aaKnown RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 KCNA4P22459 653 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 MPLP40238 635 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 SOX9P48436 509 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 LILRA4P59901 499 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 BFSP1Q12934 665 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 SRSF5Q13243 272 aaKnown RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 RUNX3Q13761 415 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 ZNF268Q14587 947 aaPredicted RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 ECM1Q16610 540 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 TXNDC11Q6PKC3 985 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 SYT13Q7L8C5 426 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 TAS1R3Q7RTX0 852 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 CMTM8Q8IZV2 173 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 DAW1Q8N136 415 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 ATAD1Q8NBU5 361 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 TMEM161BQ8NDZ6 487 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 SPPL2BQ8TCT7 592 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 RSPRY1Q96DX4 576 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 PGLYRP2Q96PD5 576 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 FAM83CQ9BQN1 747 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 RPF1Q9H9Y2 349 aaKnown RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 UXTQ9UBK9 157 aaPredicted RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 PDCD11Q14690 1871 aaKnown RBP11.08□□□□□ -0.64
RDH11-210ENST00000557331 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
RDH11-210ENST00000557331 ZZEF1O43149 2961 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 APBB3O95704 486 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 CXCL8P10145 99 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
RDH11-210ENST00000557331 CEACAM1P13688 526 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 DPP6P42658 865 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 CACNB1Q02641 598 aaPredicted RBP11.07□□□□□ -0.64
RDH11-210ENST00000557331 NR1H3Q13133 447 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 SF3A2Q15428 464 aaKnown RBP11.07□□□□□ -0.64
RDH11-210ENST00000557331 PLK5Q496M5 336 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 SPATA1Q5VX52 437 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 KBTBD6Q86V97 674 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
RDH11-210ENST00000557331 C4orf32Q8N8J7 132 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 KDF1Q8NAX2 398 aaPredicted RBP11.07□□□□□ -0.64
RDH11-210ENST00000557331 BICD1Q96G01 975 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 SENP8Q96LD8 212 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 ASB7Q9H672 318 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 GKN1Q9NS71 199 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 TDP1Q9NUW8 608 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 TUBGCP4Q9UGJ1 667 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 SLC27A5Q9Y2P5 690 aa11.07□□□□□ -0.64
RDH11-210ENST00000557331 NUP210Q8TEM1 1887 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 HNRNPDLO14979 420 aaKnown RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 OGTO15294 1046 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 EXTL3O43909 919 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 JAK2O60674 1132 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 LARGE1O95461 756 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 VNN2O95498 520 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 CAVIN2O95810 425 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 CSRP1P21291 193 aaKnown RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 U2AF2P26368 475 aaKnown RBP eCLIP11.06□□□□□ -0.643e-9■■■■□ 23.3
RDH11-210ENST00000557331 CDC25AP30304 524 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 LIG4P49917 911 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 PDE6CP51160 858 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 NEK4P51957 841 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 MAPK7Q13164 816 aa11.06□□□□□ -0.64
RDH11-210ENST00000557331 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
RDH11-210ENST00000557331 MGAT5BQ3V5L5 792 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms