RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ATRIPQ8WXE1 791 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 DDX1Q92499 740 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 FCRL2Q96LA5 508 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 TCF25Q9BQ70 676 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 GMIPQ9P107 970 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 NCDNQ9UBB6 729 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 TNFRSF10DQ9UBN6 386 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 CDH22Q9UJ99 828 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 FBXO4Q9UKT5 387 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ANGPTL2Q9UKU9 493 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ZNF215Q9UL58 517 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 PADI3Q9ULW8 664 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 MRPL11Q9Y3B7 192 aaKnown RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 PCDHGA2Q9Y5H1 932 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 GREB1LQ9C091 1923 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-223ENST00000557076 ABCB11O95342 1321 aa5.44□□□□□ -1.54
SCFD1-223ENST00000557076 DSPP15924 2871 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 TMEM82A0PJX8 343 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SLC22A31A6NKX4 558 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 TBKBP1A7MCY6 615 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 TBC1D4O60343 1298 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 RANBP6O60518 1105 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 PROS1P07225 676 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 DCNP07585 359 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SYPP08247 313 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 LAG3P18627 525 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 UBA1P22314 1058 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 ARL4AP40617 200 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 CCNFP41002 786 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 GATMP50440 423 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 HSD17B4P51659 736 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 BMS1Q14692 1282 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 BBS9Q3SYG4 887 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 USH1GQ495M9 461 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 RARS2Q5T160 578 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SPOUT1Q5T280 376 aaKnown RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 PLPP4Q5VZY2 271 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 GALNT18Q6P9A2 607 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SLC24A5Q71RS6 500 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 NME8Q8N427 588 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SLC44A3Q8N4M1 653 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 C12orf76Q8N812 135 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 ZBTB44Q8NCP5 570 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 DNAJB3Q8WWF6 145 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 NELL1Q92832 810 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SENP7Q9BQF6 1050 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 PDCD2LQ9BRP1 358 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 LRRC3Q9BY71 257 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 NAPBQ9H115 298 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 XYLT2Q9H1B5 865 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 TMX1Q9H3N1 280 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 BCAS3Q9H6U6 928 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 CWH43Q9H720 699 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 CNTD2Q9H8S5 307 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 TBC1D17Q9HA65 648 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 ENTPD7Q9NQZ7 604 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 SPG21Q9NZD8 308 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 ANAPC4Q9UJX5 808 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 CDY2AQ9Y6F7 541 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-223ENST00000557076 RALGAPA2Q2PPJ7 1873 aa5.43□□□□□ -1.54
SCFD1-223ENST00000557076 BAZ2AQ9UIF9 1905 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 ASH1LQ9NR48 2969 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 ASXL3Q9C0F0 2248 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 RRN3P2A6NIE6 340 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 SIGLEC6O43699 453 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 LRP3O75074 770 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 STAM2O75886 525 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 ATE1O95260 518 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 CXCL14O95715 111 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 MPOP05164 745 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 WEE2P0C1S8 567 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 MYCLP12524 364 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 GLULP15104 373 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 GARTP22102 1010 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 PMLP29590 882 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 PPM1AP35813 382 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 EPHB3P54753 998 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 STARD6P59095 220 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 MRPS6P82932 125 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 PAK2Q13177 524 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 LAPTM5Q13571 262 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 GIT2Q14161 759 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 SMC1AQ14683 1233 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 LETM2Q2VYF4 491 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 MARCH8Q5T0T0 291 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 KCNT2Q6UVM3 1135 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 TMC3Q7Z5M5 1100 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 GPR149Q86SP6 731 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 PANK1Q8TE04 598 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 SLC22A17Q8WUG5 538 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 GLG1Q92896 1179 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 SHDQ96IW2 340 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 CELF4Q9BZC1 486 aaKnown RBP5.42□□□□□ -1.54
SCFD1-223ENST00000557076 UBA5Q9GZZ9 404 aa5.42□□□□□ -1.54
SCFD1-223ENST00000557076 EPC1Q9H2F5 836 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms