RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 ATF7IP2Q5U623 682 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 KIAA1211LQ6NV74 962 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 SYT13Q7L8C5 426 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 DNAJB7Q7Z6W7 309 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 APPL2Q8NEU8 664 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 KIF12Q96FN5 646 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 CCDC43Q96MW1 224 aaKnown RBP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 TASP1Q9H6P5 420 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 PTPRHQ9HD43 1115 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 EVLQ9UI08 416 aaPredicted RBP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 TNFSF13BQ9Y275 285 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 ASB3Q9Y575 518 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 URB1O60287 2271 aaKnown RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 FAM205CA6NFA0 338 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 UPK3BL1B0FP48 263 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 UPK3BL2E5RIL1 263 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 M0QZQ0 153 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 APBB3O95704 486 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 FGF19O95750 216 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 CPB1P15086 417 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 CYP11B2P19099 503 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 EFNA5P52803 228 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 GPR17Q13304 367 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 RUNX3Q13761 415 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 PTPAQ15257 358 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 GPR158Q5T848 1215 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 CENPPQ6IPU0 288 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 PDZD3Q86UT5 571 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 EZH1Q92800 747 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 PSMG2Q969U7 264 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 OXCT2Q9BYC2 517 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 CDT1Q9H211 546 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 IL21Q9HBE4 155 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 TOPORSQ9NS56 1045 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 CNTN3Q9P232 1028 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 NUB1Q9Y5A7 615 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 OBSL1O75147 1896 aa12.42□□□□□ -0.42
SUPT16H-202ENST00000552829 PLXND1Q9Y4D7 1925 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ABLIM1O14639 778 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ANK1P16157 1881 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 LIG1P18858 919 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 DRD1P21728 446 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 HSPA4P34932 840 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 GALK1P51570 392 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 FBXO43Q4G163 708 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 NAV2Q8IVL1 2488 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 DEPTORQ8TB45 409 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 TNFRSF25Q93038 417 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ZNF274Q96GC6 653 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 MTMR9Q96QG7 549 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ACO2Q99798 780 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 POLR3CQ9BUI4 534 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 KIFC3Q9BVG8 833 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 SLC46A2Q9BY10 475 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 GJB4Q9NTQ9 266 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 THG1LQ9NWX6 298 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 MYO18AQ92614 2054 aaKnown RBP12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 ADAMTS9Q9P2N4 1935 aa12.41□□□□□ -0.42
SUPT16H-202ENST00000552829 MAP3K13O43283 966 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 BCKDHBP21953 392 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 PROZP22891 400 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 GABRR2P28476 465 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 MCM4P33991 863 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 AARSP49588 968 aaKnown RBP eCLIP12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 YARSP54577 528 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 SEMA3BQ13214 749 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 DMC1Q14565 340 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 UAP1L1Q3KQV9 507 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 ARHGAP15Q53QZ3 475 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 NAIF1Q69YI7 327 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 C19orf48Q6RUI8 117 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 C11orf74Q86VG3 221 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 CATSPER3Q86XQ3 398 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 TTC9BQ8N6N2 239 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 PGLYRP2Q96PD5 576 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 BBC3Q96PG8 261 aaPredicted RBP12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 EBF3Q9H4W6 596 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 TUFT1Q9NNX1 390 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 HSFX1Q9UBD0 423 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 SLC27A5Q9Y2P5 690 aa12.4□□□□□ -0.42
SUPT16H-202ENST00000552829 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 SPAARA0A1B0GVQ0 90 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 MTMR11A4FU01 709 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 OR6C75A6NL08 312 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 H0Y626 953 aa12.39□□□□□ -0.43
SUPT16H-202ENST00000552829 WNT7AO00755 349 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms