RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 PTPAQ15257 358 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 TMEM196Q5HYL7 178 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 KRT79Q5XKE5 535 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 ARMCX5Q6P1M9 558 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 KCNK18Q7Z418 384 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 LSM14BQ9BX40 385 aaKnown RBP18.36■□□□□ 0.53
CACNB3-222ENST00000552465 GKN1Q9NS71 199 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 PCDHGA5Q9Y5G8 931 aa18.36■□□□□ 0.53
CACNB3-222ENST00000552465 USP24Q9UPU5 2620 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 LACTBL1A8MY62 500 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 ATG13O75143 517 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 AKAP3O75969 853 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 KCNK5O95279 499 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 CCDC192P0DO97 292 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 CDC25AP30304 524 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 TNFSF9P41273 254 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.53
CACNB3-222ENST00000552465 MCM2P49736 904 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 CYP4F8P98187 520 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 FBXO18Q8NFZ0 1043 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 ZC3H10Q96K80 434 aaKnown RBP18.35■□□□□ 0.53
CACNB3-222ENST00000552465 LPIN3Q9BQK8 851 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 FAM83CQ9BQN1 747 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 SLC46A2Q9BY10 475 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 SMG9Q9H0W8 520 aaKnown RBP18.35■□□□□ 0.53
CACNB3-222ENST00000552465 SMOC1Q9H4F8 434 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 IL21Q9HBE4 155 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 RALYQ9UKM9 306 aaKnown RBP18.35■□□□□ 0.53
CACNB3-222ENST00000552465 NOL7Q9UMY1 257 aaKnown RBP18.35■□□□□ 0.53
CACNB3-222ENST00000552465 SLC8A2Q9UPR5 921 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 ZFHX4Q86UP3 3567 aa18.35■□□□□ 0.53
CACNB3-222ENST00000552465 RALGAPA1Q6GYQ0 2036 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 TRDMT1O14717 391 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 PPEF2O14830 753 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 XPOTO43592 962 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 CDC25CP30307 473 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 TUFMP49411 452 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 LILRA4P59901 499 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 PPP2R3AQ06190 1150 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 RAD51AP2Q09MP3 1159 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 GRSF1Q12849 480 aaKnown RBP eCLIP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 IL17AQ16552 155 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 CAMKK1Q8N5S9 505 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 SENP8Q96LD8 212 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 TSPAN18Q96SJ8 248 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 MMTAG2Q9BU76 263 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 VPS45Q9NRW7 570 aa18.34■□□□□ 0.53
CACNB3-222ENST00000552465 PDCD11Q14690 1871 aaKnown RBP18.34■□□□□ 0.53
CACNB3-222ENST00000552465 ADRB2P07550 413 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 ODC1P11926 461 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 MPLP40238 635 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 TOB1P50616 345 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-222ENST00000552465 RUNX3Q13761 415 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 KYAT1Q16773 422 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 SPATA1Q5VX52 437 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 CMTM8Q8IZV2 173 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 OR10T2Q8NGX3 314 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 CHFRQ96EP1 664 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 SEPT5Q99719 369 aaPredicted RBP18.33■□□□□ 0.52
CACNB3-222ENST00000552465 HPS4Q9NQG7 708 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 PCDHB6Q9Y5E3 794 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 CITO14578 2027 aa18.33■□□□□ 0.52
CACNB3-222ENST00000552465 OTOL1A6NHN0 477 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-222ENST00000552465 PROS1P07225 676 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 ATF6P18850 670 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 PAX3P23760 479 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 VEPH1Q14D04 833 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 ENOX2Q16206 610 aaKnown RBP18.32■□□□□ 0.52
CACNB3-222ENST00000552465 MGAT5BQ3V5L5 792 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 PLK5Q496M5 336 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 BICD1Q96G01 975 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 GCNAQ96QF7 691 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 LLPHQ9BRT6 129 aaKnown RBP18.32■□□□□ 0.52
CACNB3-222ENST00000552465 ZCWPW1Q9H0M4 648 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 POLR3BQ9NW08 1133 aaPredicted RBP18.32■□□□□ 0.52
CACNB3-222ENST00000552465 ZMYM5Q9UJ78 669 aa18.32■□□□□ 0.52
CACNB3-222ENST00000552465 LAD1O00515 517 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 FAM189A1O60320 539 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 EGFP01133 1207 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 CYP11A1P05108 521 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 PRPHP41219 470 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 CDR1P51861 262 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 TAF12Q16514 161 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 SLC39A12Q504Y0 691 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 C9orf57Q5W0N0 161 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 RNF43Q68DV7 783 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 CCDC83Q8IWF9 413 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
CACNB3-222ENST00000552465 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 DUSP15Q9H1R2 295 aaPredicted RBP18.31■□□□□ 0.52
CACNB3-222ENST00000552465 EBF3Q9H4W6 596 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 RPF1Q9H9Y2 349 aaKnown RBP18.31■□□□□ 0.52
CACNB3-222ENST00000552465 FBRSL1Q9HCM7 1045 aaKnown RBP18.31■□□□□ 0.52
CACNB3-222ENST00000552465 GREB1Q4ZG55 1949 aa18.31■□□□□ 0.52
CACNB3-222ENST00000552465 CNOT1A5YKK6 2376 aaKnown RBP18.31■□□□□ 0.52
CACNB3-222ENST00000552465 H0YCG3 227 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 PIRO00625 290 aa18.3■□□□□ 0.52
CACNB3-222ENST00000552465 RNF40O75150 1001 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms