RNA–Protein interactions for RNA: ENST00000549275.5

TROAP-209, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TROAP, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-209ENST00000549275 NAF1Q96HR8 494 aaKnown RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 CEP89Q96ST8 783 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 SPZ1Q9BXG8 430 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 KRT23Q9C075 422 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
TROAP-209ENST00000549275 MINDY3Q9H8M7 445 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 BTBD3Q9Y2F9 522 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 COL4A3BPQ9Y5P4 624 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 BOD1L1Q8NFC6 3051 aa11.61□□□□□ -0.55
TROAP-209ENST00000549275 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 K7EQS6 105 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 B3GAT3O94766 335 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 THP07101 528 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 USP11P51784 963 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 ARPP19P56211 112 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 HLA-BQ31612 363 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 MTERF2Q49AM1 385 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 TSHZ3Q63HK5 1081 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
TROAP-209ENST00000549275 PLA2G4DQ86XP0 818 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 LSMEM2Q8N112 164 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 SPATA20Q8TB22 786 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 HMGB4Q8WW32 186 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 KIF9Q9HAQ2 790 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 KLK14Q9P0G3 267 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 ASB3Q9Y575 518 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 PTPRDP23468 1912 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 TTC41PQ6P2S7 1318 aa11.6□□□□□ -0.55
TROAP-209ENST00000549275 MYH9P35579 1960 aaKnown RBP11.59□□□□□ -0.55
TROAP-209ENST00000549275 BSNQ9UPA5 3926 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 HELZP42694 1942 aaKnown RBP11.59□□□□□ -0.55
TROAP-209ENST00000549275 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
TROAP-209ENST00000549275 TSPAN1O60635 241 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 RFPL3O75679 317 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 RECQL4O94761 1208 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 ARSAP15289 507 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 EPHB3P54753 998 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 MCMDC2Q4G0Z9 681 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 HES3Q5TGS1 186 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 USP49Q70CQ1 688 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 GAREM2Q75VX8 874 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 GMIPQ9P107 970 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 FTSJ1Q9UET6 329 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 YIPF1Q9Y548 306 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 LRBAP50851 2863 aa11.59□□□□□ -0.55
TROAP-209ENST00000549275 NUP210Q8TEM1 1887 aaPredicted RBP11.59□□□□□ -0.55
TROAP-209ENST00000549275 IGHV1OR15-9A0A0B4J2B8 117 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 TCRBV21S2A2A0A5A6 115 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 SYN3O14994 580 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 PCDHGA12O60330 932 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 MS4A1P11836 297 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 SEC13P55735 322 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 ERVPABLB-1P60509 514 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 SETQ01105 290 aaPredicted RBP11.58□□□□□ -0.56
TROAP-209ENST00000549275 NR1H3Q13133 447 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 NAB2Q15742 525 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 FBXL19Q6PCT2 694 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 TXNDC5Q8NBS9 432 aaKnown RBP11.58□□□□□ -0.56
TROAP-209ENST00000549275 NANOS1Q8WY41 292 aaKnown RBP11.58□□□□□ -0.56
TROAP-209ENST00000549275 DNASE2BQ8WZ79 361 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 CHMP4BQ9H444 224 aaKnown RBP11.58□□□□□ -0.56
TROAP-209ENST00000549275 DISC1Q9NRI5 854 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 ABCA2Q9BZC7 2435 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.56
TROAP-209ENST00000549275 ICE1Q9Y2F5 2266 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 NF1P21359 2839 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 BAZ2BQ9UIF8 2168 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 ASAP2O43150 1006 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 MARCH6O60337 910 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 DXOO77932 396 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 SRGAP2CP0DJJ0 459 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 RLBP1P12271 317 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 GABRR2P28476 465 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 MRPL58Q14197 206 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 SF3A1Q15459 793 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 TICAM2Q86XR7 235 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 EXOC8Q8IYI6 725 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 CMTM8Q8IZV2 173 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 IL17RCQ8NAC3 791 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 PSPC1Q8WXF1 523 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 UROC1Q96N76 676 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 DNAJC25Q9H1X3 360 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 FBXL5Q9UKA1 691 aa11.57□□□□□ -0.56
TROAP-209ENST00000549275 UTP20O75691 2785 aaKnown RBP11.57□□□□□ -0.56
TROAP-209ENST00000549275 IGLV3-22A0A075B6J6 115 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 FAM86B1E9PN63 330 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 SGK1O00141 431 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 PTGESO14684 152 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 NDUFS2O75306 463 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 ITGB2P05107 769 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 FAM86B2P0C5J1 330 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 CDC25CP30307 473 aa11.56□□□□□ -0.56
TROAP-209ENST00000549275 SFNP31947 248 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms