RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 SNX27Q96L92 541 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 NT5C1BQ96P26 610 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PANX2Q96RD6 677 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 TSPAN18Q96SJ8 248 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PI4K2AQ9BTU6 479 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 GRIP2Q9C0E4 1043 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 NUCKS1Q9H1E3 243 aaKnown RBP7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PRM3Q9NNZ6 103 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 UBN1Q9NPG3 1134 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 RGS18Q9NS28 235 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 C1orf112Q9NSG2 853 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 DPP3Q9NY33 737 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 APEX2Q9UBZ4 518 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 LRFN2Q9ULH4 789 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 GIT1Q9Y2X7 761 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 DERAQ9Y315 318 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 COQ4Q9Y3A0 265 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 C2CD2Q9Y426 696 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 PCDHB7Q9Y5E2 793 aa7.14□□□□□ -1.27
CLTCL1-206ENST00000540896 SMIM28A0A1B0GU29 152 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 LRRC53A6NM62 1247 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 RBAK-RBAKDNI3L0D1 243 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ENPP3O14638 875 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 EPHB6O15197 1021 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 MGEA5O60502 916 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ZC3H11AO75152 810 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 OFD1O75665 1012 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 NOL4O94818 638 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CST3P01034 146 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CELA2BP08218 269 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CCDC172P0C7W6 258 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ACRP10323 421 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 SKILP12757 684 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 RFX1P22670 979 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 MLH1P40692 756 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 STAT1P42224 750 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 MYL6P60660 151 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 MYO1EQ12965 1108 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 PPIGQ13427 754 aaKnown RBP eCLIP7.13□□□□□ -1.273e-7■■■■■ 32
CLTCL1-206ENST00000540896 IKBKEQ14164 716 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ASIC2Q16515 512 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ZNF699Q32M78 642 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 HS1BP3Q53T59 392 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 PLEKHG4Q58EX7 1191 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 IQCEQ6IPM2 695 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 PHLDB3Q6NSJ2 640 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 PDXDC1Q6P996 788 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 GJB7Q6PEY0 223 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 LYPD4Q6UWN0 246 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 GLB1LQ6UWU2 654 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 FAM43BQ6ZT52 329 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ECHDC2Q86YB7 292 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 EFCAB13Q8IY85 973 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ABI1Q8IZP0 508 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 TC2NQ8N9U0 490 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 LMO3Q8TAP4 145 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ELMO3Q96BJ8 720 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 HPDLQ96IR7 371 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 FAM81BQ96LP2 452 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 GAD1Q99259 594 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 BAG1Q99933 345 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 STK33Q9BYT3 514 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 GANQ9H2C0 597 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 RSAD1Q9HA92 442 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 SIX2Q9NPC8 291 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ABHD10Q9NUJ1 306 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 RNF19AQ9NV58 838 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 SLC38A7Q9NVC3 462 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CUEDC1Q9NWM3 386 aaPredicted RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ITGA11Q9UKX5 1188 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 UBQLN1Q9UMX0 589 aaKnown RBP7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 AGAP1Q9UPQ3 857 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 INPP5FQ9Y2H2 1132 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 DAAM1Q9Y4D1 1078 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 PCDHB11Q9Y5F2 797 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 FHOD1Q9Y613 1164 aa7.13□□□□□ -1.27
CLTCL1-206ENST00000540896 ARL5CA6NH57 179 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 MEFVO15553 781 aaPredicted RBP7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 LRRN2O75325 713 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 GFPT2O94808 682 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 VNN1O95497 513 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 EOMESO95936 686 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 ASS1P00966 412 aaKnown RBP7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 POMCP01189 267 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 CXCL10P02778 98 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 THP07101 528 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 KRT5P13647 590 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 P4HA1P13674 534 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 KCNE1P15382 129 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 FERP16591 822 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 ATF7P17544 494 aaPredicted RBP7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 POLR2BP30876 1174 aaKnown RBP7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 ATICP31939 592 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 MAGEA10P43363 369 aaPredicted RBP7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 SCNN1GP51170 649 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 GUCY2FP51841 1108 aa7.12□□□□□ -1.27
CLTCL1-206ENST00000540896 EPHB4P54760 987 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms