RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 GJC2Q5T442 439 aaPredicted RBP14.93□□□□□ -0.02
COLCA1-204ENST00000540738 CYFIP2Q96F07 1278 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 PI4K2AQ9BTU6 479 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 STN1Q9H668 368 aaKnown RBP14.93□□□□□ -0.02
COLCA1-204ENST00000540738 MRPL17Q9NRX2 175 aaKnown RBP14.93□□□□□ -0.02
COLCA1-204ENST00000540738 KIF13AQ9H1H9 1805 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 BCL9LQ86UU0 1499 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 FAM187AA6NFU0 413 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 CKBP12277 381 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 ADCY2Q08462 1091 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 GAS2L3Q86XJ1 694 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 RIN2Q8WYP3 895 aaPredicted RBP14.93□□□□□ -0.02
COLCA1-204ENST00000540738 ZNF518BQ9C0D4 1074 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 FHOD1Q9Y613 1164 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 NFAT5O94916 1531 aa14.93□□□□□ -0.02
COLCA1-204ENST00000540738 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 MAP3K13O43283 966 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 ZNF500O60304 480 aaPredicted RBP14.92□□□□□ -0.02
COLCA1-204ENST00000540738 SETSIPP0DME0 302 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 OXCT1P55809 520 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 PRAMEF19Q5SWL8 479 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 HASPINQ8TF76 798 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 SDCCAG3Q96C92 435 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CDY2AQ9Y6F7 541 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 FOXP2O15409 715 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 PKN1Q16512 942 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 DBN1Q16643 649 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 UNC45BQ8IWX7 931 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 SNX19Q92543 992 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CINPQ9BW66 212 aaPredicted RBP14.92□□□□□ -0.02
COLCA1-204ENST00000540738 KRT82Q9NSB4 513 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 YDJCA8MPS7 323 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 FAM86B1E9PN63 330 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 GRAP2O75791 330 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 TTC4O95801 387 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 FAM86B2P0C5J1 330 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CXCL8P10145 99 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 MAP4P27816 1152 aaKnown RBP14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CYP24A1Q07973 514 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 C6orf118Q5T5N4 469 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 A0A1B0GTH6 734 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 HIST1H2AGP0C0S8 130 aaPredicted RBP14.92□□□□□ -0.02
COLCA1-204ENST00000540738 HIST1H2ADP20671 130 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 IFNA8P32881 189 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CTNNB1P35222 781 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 ZNF557Q8N988 423 aaPredicted RBP14.92□□□□□ -0.02
COLCA1-204ENST00000540738 CSGALNACT1Q8TDX6 532 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 HIST1H2AHQ96KK5 128 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 HIST1H2AJQ99878 128 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 H2AFJQ9BTM1 129 aa14.92□□□□□ -0.02
COLCA1-204ENST00000540738 RTN3O95197 1032 aaPredicted RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 NTRK3Q16288 839 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 C4orf22Q6V702 233 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 PRDM10Q9NQV6 1147 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 DDX43Q9NXZ2 648 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 PCDHAC2Q9Y5I4 1007 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 COPEO14579 308 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 SLC9A1P19634 815 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 KLHDC7AQ5VTJ3 777 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 ARMC6Q6NXE6 501 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 KIF2CQ99661 725 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 CELF4Q9BZC1 486 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 MFSD1Q9H3U5 465 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 SUN2Q9UH99 717 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 PLA2G4CQ9UP65 541 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 SNX24Q9Y343 169 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 M0QYT0 321 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 SYDE1Q6ZW31 735 aaPredicted RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 DDI1Q8WTU0 396 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 TRAPPC12Q8WVT3 735 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 KCNN4O15554 427 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 EPHB2P29323 1055 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 OAS2P29728 719 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 CASP2P42575 452 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 MNAT1P51948 309 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 GALCP54803 685 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 UGP2Q16851 508 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 DUSP28Q4G0W2 176 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 PABPC1LQ4VXU2 614 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 CBWD1Q9BRT8 395 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 IGFLR1Q9H665 355 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 CHST12Q9NRB3 414 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 SALL3Q9BXA9 1300 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 LTBP3Q9NS15 1303 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 MYO1DO94832 1006 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 FARP2O94887 1054 aaPredicted RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 ASS1P00966 412 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 CCL23P55773 120 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 GEMIN4P57678 1058 aaKnown RBP14.91□□□□□ -0.02
COLCA1-204ENST00000540738 TMEM86AQ8N2M4 240 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 ATP11CQ8NB49 1132 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 FEZF2Q8TBJ5 459 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 LRGUKQ96M69 825 aa14.91□□□□□ -0.02
COLCA1-204ENST00000540738 TTC7AQ9ULT0 858 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms