RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 SETXQ7Z333 2677 aaKnown RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 MOSPD3O75425 235 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 TOM1L1O75674 476 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 MAPTP10636 758 aaKnown RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 KCNE1P15382 129 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 GJA1P17302 382 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 IGFBP6P24592 240 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ABCD1P33897 745 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 NCKAP1LP55160 1127 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ZNF252P-AS1Q0IIN9 211 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 PLD1Q13393 1074 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 CCINQ13939 588 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 PON2Q15165 354 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 PTPAQ15257 358 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ELF2Q15723 593 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ZNF568Q3ZCX4 644 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 CTXN3Q4LDR2 81 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ZNF280DQ6N043 979 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 TXNDC11Q6PKC3 985 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 CD300LGQ6UXG3 332 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 C3orf58Q8NDZ4 430 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 ACAP3Q96P50 834 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 PLIN2Q99541 437 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 TCHPQ9BT92 498 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 EDEM2Q9BV94 578 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 BLOC1S4Q9NUP1 217 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 C2orf42Q9NWW7 574 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 CEP72Q9P209 647 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 AFF4Q9UHB7 1163 aaKnown RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 FBXL5Q9UKA1 691 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
CPSF1-203ENST00000527916 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
CPSF1-203ENST00000527916 FLNBO75369 2602 aaKnown RBP11.44□□□□□ -0.58
CPSF1-203ENST00000527916 FREM2Q5SZK8 3169 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 PODXLO00592 558 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 EXTL3O43909 919 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 CPB1P15086 417 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 DDIT3P35638 169 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 PXNP49023 591 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-203ENST00000527916 ZNF131P52739 623 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 MCL1Q07820 350 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 ARID3BQ8IVW6 561 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-203ENST00000527916 CEP120Q8N960 986 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 SHKBP1Q8TBC3 707 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 SMOC1Q9H4F8 434 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 PLEKHA5Q9HAU0 1116 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 GTSE1Q9NYZ3 720 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 CNTN3Q9P232 1028 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-203ENST00000527916 ATG2BQ96BY7 2078 aa11.44□□□□□ -0.58
CPSF1-203ENST00000527916 GCN1Q92616 2671 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 NCANO14594 1321 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 A0A1W2PRU2 124 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 VPS37CA5D8V6 355 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 SRRM3A6NNA2 597 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 C4orf47A7E2U8 309 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 CLDN3O15551 220 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RHOBTB1O94844 696 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 PIGRP01833 764 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 CEACAM1P13688 526 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 SYT1P21579 422 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RPL9P32969 192 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 EPHB3P54753 998 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 GRIN1Q05586 938 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RAD51AP2Q09MP3 1159 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RESTQ13127 1097 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 MRPL58Q14197 206 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 KARSQ15046 597 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 KYAT1Q16773 422 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ITPRIPL2Q3MIP1 535 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 SH3PXD2AQ5TCZ1 1133 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 CAMKK1Q8N5S9 505 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 TTC8Q8TAM2 541 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ZCCHC14Q8WYQ9 949 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RAD54LQ92698 747 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 RSPRY1Q96DX4 576 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ZBTB45Q96K62 511 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ZMAT2Q96NC0 199 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 TSPAN18Q96SJ8 248 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 TMEM209Q96SK2 561 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 REEP2Q9BRK0 252 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 THG1LQ9NWX6 298 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 OBP2AQ9NY56 170 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
CPSF1-203ENST00000527916 CLIC4Q9Y696 253 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 ITPR1Q14643 2758 aa11.43□□□□□ -0.58
CPSF1-203ENST00000527916 NPHP3-ACAD11A0A0J9YXS1 232 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 GIPC1O14908 333 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 FGF19O95750 216 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 CAVIN2O95810 425 aa11.42□□□□□ -0.58
CPSF1-203ENST00000527916 PLCG1P19174 1290 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms