RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 KCNT1Q5JUK3 1230 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 FNBP1LQ5T0N5 605 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 TMEM270Q6UE05 265 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 KIFAP3Q92845 792 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
CAPN1-202ENST00000524773 MMP10P09238 476 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 CETN2P41208 172 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 KLC1Q07866 573 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 CCDC15Q0P6D6 951 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 CCNG2Q16589 344 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 SLC30A9Q6PML9 568 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 TTC17Q96AE7 1141 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 GRAMD1AQ96CP6 724 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 GMCL1Q96IK5 515 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 TYROBPO43914 113 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 TCEA3O75764 348 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 DCTN3O75935 186 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 PROSCO94903 275 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 KRT1P04264 644 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 VIL1P09327 827 aaKnown RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 KITP10721 976 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 HARSP12081 509 aaKnown RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 NPTX2P47972 431 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 NFX1Q12986 1120 aaKnown RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 C11orf91Q3C1V1 193 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 WDR72Q3MJ13 1102 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 ALYREFQ86V81 257 aaKnown RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 BICD1Q96G01 975 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 CYTH2Q99418 400 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 MARCOQ9UEW3 520 aaPredicted RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 E5RJQ4 531 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 GYG2O15488 501 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 LIASO43766 372 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 FAM155BO75949 473 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 PTPN4P29074 926 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 SMAD1Q15797 465 aaKnown RBP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 LDHDQ86WU2 507 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.89□□□□□ -0.19
CAPN1-202ENST00000524773 ZNF333Q96JL9 665 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 UBE4BO95155 1302 aa13.89□□□□□ -0.19
CAPN1-202ENST00000524773 CCDC195A0A1B0GUA6 201 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 WFS1O76024 890 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 USP1O94782 785 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 TNNI1P19237 187 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 BGNP21810 368 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 PAPOLAP51003 745 aaKnown RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 THOC5Q13769 683 aaKnown RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 LRRC36Q1X8D7 754 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 ZBTB41Q5SVQ8 909 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 RHPN2Q8IUC4 686 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 RHOT1Q8IXI2 618 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 GMCL1P1Q8NEA9 526 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 PRMT6Q96LA8 375 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 SH3GL3Q99963 347 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 MECRQ9BV79 373 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 TMEM8AQ9HCN3 771 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 CLUHO75153 1309 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 FAM237BA0A1B0GVD1 139 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 DNALI1O14645 258 aaPredicted RBP13.88□□□□□ -0.19
CAPN1-202ENST00000524773 GLRA2P23416 452 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 GTF2BQ00403 316 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 BBS9Q3SYG4 887 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 TMEM130Q8N3G9 435 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 MCUR1Q96AQ8 359 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 MXRA8Q9BRK3 442 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 GINM1Q9NU53 330 aa13.88□□□□□ -0.19
CAPN1-202ENST00000524773 GSC2O15499 205 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 DHX15O43143 795 aaKnown RBP13.87□□□□□ -0.19
CAPN1-202ENST00000524773 P4HBP07237 508 aaKnown RBP13.87□□□□□ -0.19
CAPN1-202ENST00000524773 RASSF2P50749 326 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 GPC3P51654 580 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 TSNAXIP1Q2TAA8 658 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 CYP4A22Q5TCH4 519 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 C3orf62Q6ZUJ4 267 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 SP8Q8IXZ3 490 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-202ENST00000524773 TMEM161BQ8NDZ6 487 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 MCEEQ96PE7 176 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 FAM111AQ96PZ2 611 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 MAGEB2O15479 319 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 QARSP47897 775 aaKnown RBP13.87□□□□□ -0.19
CAPN1-202ENST00000524773 OGDHQ02218 1023 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 CAV1Q03135 178 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 MON1BQ7L1V2 547 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 INPP5DQ92835 1189 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 ZBTB45Q96K62 511 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-202ENST00000524773 TMEM120AQ9BXJ8 343 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 ZWILCHQ9H900 591 aa13.87□□□□□ -0.19
CAPN1-202ENST00000524773 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms