RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 ORC4O43929 436 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 URI1O94763 535 aaPredicted RBP3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 CLSTN1O94985 981 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 CYP2D6P10635 497 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SFPQP23246 707 aaKnown RBP eCLIP3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 CCT8P50990 548 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 CDC42EP1Q00587 391 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 AMPD3Q01432 767 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 TLE1Q04724 770 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 TUBB3Q13509 450 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 BOP1Q14137 746 aaKnown RBP3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 LLGL1Q15334 1064 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 CEP78Q5JTW2 689 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 GJC2Q5T442 439 aaPredicted RBP3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 TAF2Q6P1X5 1199 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 YTHDF3Q7Z739 585 aaKnown RBP3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SEMA6DQ8NFY4 1073 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 POC1BQ8TC44 478 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 ACTRT3Q9BYD9 372 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SPC25Q9HBM1 224 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SLAMF7Q9NQ25 335 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SLC5A4Q9NY91 659 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 SH3BP4Q9P0V3 963 aa3.58□□□□□ -1.84
EFCAB13-212ENST00000523842 ZNF785A8K8V0 405 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 TARM1B6A8C7 271 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 TISP43B9A030 160 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 F2RL2O00254 374 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 LATS1O95835 1130 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 TTLL1O95922 423 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 KELP23276 732 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 EPHB2P29323 1055 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 WASP42768 502 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 TOB1P50616 345 aaPredicted RBP3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 SNAPC2Q13487 334 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 MTMR1Q13613 665 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 TBCCQ15814 346 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 FAM153CQ494X1 144 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 KHDC1Q4VXA5 237 aaKnown RBP3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 RBM20Q5T481 1227 aaKnown RBP3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 ZCCHC6Q5VYS8 1495 aaKnown RBP3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 WASHC2AQ641Q2 1341 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 RB1CC1Q8TDY2 1594 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 FKBP10Q96AY3 582 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 REPS1Q96D71 796 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 ZNF521Q96K83 1311 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 MACROD1Q9BQ69 325 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 C1orf43Q9BWL3 253 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 ETAA1Q9NY74 926 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 FLRT1Q9NZU1 646 aa3.57□□□□□ -1.84
EFCAB13-212ENST00000523842 ZNF804BA4D1E1 1349 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 TRIM75PA6NK02 468 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ZNF213O14771 459 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 PPM1DO15297 605 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 KATNA1O75449 491 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 KIF20AO95235 890 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 IGKV2-30P06310 120 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 CPEP16870 476 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ZFXP17010 805 aaPredicted RBP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 NDUFV1P49821 464 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 NXPH1P58417 271 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 KIF23Q02241 960 aaPredicted RBP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ITIH3Q06033 890 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 FAPQ12884 760 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 FAM50AQ14320 339 aaKnown RBP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 HLXQ14774 488 aaPredicted RBP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 PCBP2Q15366 365 aaKnown RBP eCLIP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ATP2B3Q16720 1220 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ABCB5Q2M3G0 1257 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 PROSER3Q2NL68 480 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 CCDC93Q567U6 631 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 GADL1Q6ZQY3 521 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 MIGA2Q7L4E1 593 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 AMOTL1Q8IY63 956 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 PSD4Q8NDX1 1056 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 C1orf162Q8NEQ5 155 aaPredicted RBP3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 SSH1Q8WYL5 1049 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 WASF1Q92558 559 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 HDAC10Q969S8 669 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 PBKQ96KB5 322 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 SMOQ99835 787 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 TRHDEQ9UKU6 1024 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 BTBD3Q9Y2F9 522 aa3.56□□□□□ -1.84
EFCAB13-212ENST00000523842 NT5C1B-RDH14C9J2C7 533 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 GABRDO14764 452 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 GJB1P08034 283 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 CDK11BP21127 795 aaKnown RBP3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 MALP21145 153 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 CLCN2P51788 898 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 ZNF135P52742 658 aaPredicted RBP3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 POU6F2P78424 691 aaPredicted RBP3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 DSC2Q02487 901 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 ODF1Q14990 250 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 SLC18B1Q6NT16 456 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 PRPF38AQ8NAV1 312 aaKnown RBP3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 KLHDC4Q8TBB5 520 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 FAXDC2Q96IV6 333 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 PUS7LQ9H0K6 701 aaKnown RBP3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 BHMT2Q9H2M3 363 aa3.55□□□□□ -1.84
EFCAB13-212ENST00000523842 SERTAD4Q9NUC0 356 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms