RNA–Protein interactions for RNA: ENST00000523842.1

EFCAB13-212, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-212ENST00000523842 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
EFCAB13-212ENST00000523842 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
EFCAB13-212ENST00000523842 SENP3Q9H4L4 574 aaPredicted RBP17.26■□□□□ 0.35
EFCAB13-212ENST00000523842 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
EFCAB13-212ENST00000523842 FOXD1Q16676 465 aa16.22■□□□□ 0.19
EFCAB13-212ENST00000523842 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
EFCAB13-212ENST00000523842 PPP6R1Q9UPN7 881 aa15.31■□□□□ 0.04
EFCAB13-212ENST00000523842 ADRA2BP18089 450 aa15.25■□□□□ 0.03
EFCAB13-212ENST00000523842 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
EFCAB13-212ENST00000523842 PIAS4Q8N2W9 510 aaPredicted RBP15.13■□□□□ 0.01
EFCAB13-212ENST00000523842 MSH5O43196 834 aa14.98□□□□□ -0.01
EFCAB13-212ENST00000523842 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
EFCAB13-212ENST00000523842 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
EFCAB13-212ENST00000523842 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
EFCAB13-212ENST00000523842 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
EFCAB13-212ENST00000523842 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
EFCAB13-212ENST00000523842 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
EFCAB13-212ENST00000523842 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
EFCAB13-212ENST00000523842 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
EFCAB13-212ENST00000523842 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
EFCAB13-212ENST00000523842 NPM3O75607 178 aaKnown RBP12.98□□□□□ -0.33
EFCAB13-212ENST00000523842 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
EFCAB13-212ENST00000523842 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
EFCAB13-212ENST00000523842 KCNA4P22459 653 aa12.86□□□□□ -0.35
EFCAB13-212ENST00000523842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.66□□□□□ -0.38
EFCAB13-212ENST00000523842 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
EFCAB13-212ENST00000523842 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
EFCAB13-212ENST00000523842 U3KPZ7 1027 aaPredicted RBP12.45□□□□□ -0.42
EFCAB13-212ENST00000523842 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
EFCAB13-212ENST00000523842 SPINK5Q9NQ38 1064 aaPredicted RBP12.31□□□□□ -0.44
EFCAB13-212ENST00000523842 CAPN15O75808 1086 aa12.21□□□□□ -0.45
EFCAB13-212ENST00000523842 DSG3P32926 999 aa12.11□□□□□ -0.47
EFCAB13-212ENST00000523842 SLC4A1APQ9BWU0 796 aaKnown RBP12.07□□□□□ -0.48
EFCAB13-212ENST00000523842 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
EFCAB13-212ENST00000523842 ABCB7O75027 752 aa12.01□□□□□ -0.49
EFCAB13-212ENST00000523842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.91□□□□□ -0.5
EFCAB13-212ENST00000523842 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
EFCAB13-212ENST00000523842 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
EFCAB13-212ENST00000523842 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
EFCAB13-212ENST00000523842 ZBTB22O15209 634 aa11.88□□□□□ -0.51
EFCAB13-212ENST00000523842 ZNF219Q9P2Y4 722 aaPredicted RBP11.88□□□□□ -0.51
EFCAB13-212ENST00000523842 APLP2Q06481 763 aa11.85□□□□□ -0.51
EFCAB13-212ENST00000523842 FOXD4L1Q9NU39 408 aa11.85□□□□□ -0.51
EFCAB13-212ENST00000523842 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
EFCAB13-212ENST00000523842 POLA2Q14181 598 aa11.74□□□□□ -0.53
EFCAB13-212ENST00000523842 POTEHQ6S545 545 aa11.6□□□□□ -0.55
EFCAB13-212ENST00000523842 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
EFCAB13-212ENST00000523842 RBM42Q9BTD8 480 aaKnown RBP11.39□□□□□ -0.59
EFCAB13-212ENST00000523842 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
EFCAB13-212ENST00000523842 CSRNP3Q8WYN3 585 aa11.34□□□□□ -0.59
EFCAB13-212ENST00000523842 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
EFCAB13-212ENST00000523842 EHMT2Q96KQ7 1210 aa11.3□□□□□ -0.6
EFCAB13-212ENST00000523842 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-212ENST00000523842 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
EFCAB13-212ENST00000523842 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
EFCAB13-212ENST00000523842 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
EFCAB13-212ENST00000523842 FBLN2P98095 1184 aa11.14□□□□□ -0.63
EFCAB13-212ENST00000523842 PITPNM1O00562 1244 aa11.1□□□□□ -0.63
EFCAB13-212ENST00000523842 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
EFCAB13-212ENST00000523842 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
EFCAB13-212ENST00000523842 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
EFCAB13-212ENST00000523842 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
EFCAB13-212ENST00000523842 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
EFCAB13-212ENST00000523842 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
EFCAB13-212ENST00000523842 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.66
EFCAB13-212ENST00000523842 CLEC11AQ9Y240 323 aa10.93□□□□□ -0.66
EFCAB13-212ENST00000523842 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
EFCAB13-212ENST00000523842 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
EFCAB13-212ENST00000523842 HAX1O00165 279 aa10.81□□□□□ -0.68
EFCAB13-212ENST00000523842 EVX2Q03828 476 aa10.81□□□□□ -0.68
EFCAB13-212ENST00000523842 PRKAR2AP13861 404 aaKnown RBP10.8□□□□□ -0.68
EFCAB13-212ENST00000523842 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
EFCAB13-212ENST00000523842 SP7Q8TDD2 431 aaPredicted RBP10.76□□□□□ -0.69
EFCAB13-212ENST00000523842 PRR29P0C7W0 189 aa10.69□□□□□ -0.7
EFCAB13-212ENST00000523842 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
EFCAB13-212ENST00000523842 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
EFCAB13-212ENST00000523842 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
EFCAB13-212ENST00000523842 CREBZFQ9NS37 354 aa10.51□□□□□ -0.73
EFCAB13-212ENST00000523842 GABBR2O75899 941 aa10.45□□□□□ -0.74
EFCAB13-212ENST00000523842 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
EFCAB13-212ENST00000523842 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
EFCAB13-212ENST00000523842 PROM2Q8N271 834 aa10.38□□□□□ -0.75
EFCAB13-212ENST00000523842 MNX1P50219 401 aaPredicted RBP10.34□□□□□ -0.75
EFCAB13-212ENST00000523842 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
EFCAB13-212ENST00000523842 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
EFCAB13-212ENST00000523842 FKBP8Q14318 412 aa10.27□□□□□ -0.77
EFCAB13-212ENST00000523842 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
EFCAB13-212ENST00000523842 ZNF579Q8NAF0 562 aaKnown RBP10.24□□□□□ -0.77
EFCAB13-212ENST00000523842 GALR2O43603 387 aaPredicted RBP10.22□□□□□ -0.77
EFCAB13-212ENST00000523842 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
EFCAB13-212ENST00000523842 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
EFCAB13-212ENST00000523842 MIER1Q8N108 512 aa10.18□□□□□ -0.78
EFCAB13-212ENST00000523842 TSPYL2Q9H2G4 693 aaPredicted RBP10.17□□□□□ -0.78
EFCAB13-212ENST00000523842 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
EFCAB13-212ENST00000523842 DCBLD2Q96PD2 775 aa10.12□□□□□ -0.79
EFCAB13-212ENST00000523842 LHX8Q68G74 356 aa10.11□□□□□ -0.79
EFCAB13-212ENST00000523842 RASEFQ8IZ41 740 aa10.1□□□□□ -0.79
EFCAB13-212ENST00000523842 PLCD3Q8N3E9 789 aa10.08□□□□□ -0.8
EFCAB13-212ENST00000523842 MS4A3Q96HJ5 214 aa10.08□□□□□ -0.8
EFCAB13-212ENST00000523842 PELP1Q8IZL8 1130 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms