RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ASAP3Q8TDY4 903 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 RGPD5Q99666 1765 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 KRT10P13645 584 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 LRRIQ3A6PVS8 624 aaPredicted RBP13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ITIH2P19823 946 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 NAA25Q14CX7 972 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ARSHQ5FYA8 562 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ATP6V1E2Q96A05 226 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 VPS39Q96JC1 886 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 FGFBP2Q9BYJ0 223 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SP110Q9HB58 689 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ACP6Q9NPH0 428 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 TMEM51Q9NW97 253 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 SNTG2Q9NY99 539 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 HPCAL4Q9UM19 191 aa13.74□□□□□ -0.21
PCDHGB1-201ENST00000523390 ACKR2O00590 384 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 COILP38432 576 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 HSD17B4P51659 736 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 BEND6Q5SZJ8 279 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZNF449Q6P9G9 518 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 USP33Q8TEY7 942 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 UBN1Q9NPG3 1134 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 VAV3Q9UKW4 847 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 A0A0G2JND7 137 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 CCDC78A2IDD5 438 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 PPP1R12AO14974 1030 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 FAM200BP0CF97 657 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ACO1P21399 889 aaKnown RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 RAB3IPQ96QF0 476 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 IGKV6D-41A0A0C4DH26 115 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 GOLGA8RI6L899 631 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 LGALS2P05162 132 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 SERPINB6P35237 376 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 PNPLA4P41247 253 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 CDH8P55286 799 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 SESN3P58005 492 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 MEA1Q16626 185 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 LONRF1Q17RB8 773 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZPBP2Q6X784 338 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 TLK2Q86UE8 772 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 PORCNQ9H237 461 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 CASZ1Q86V15 1759 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 COL1A1P02452 1464 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 H3BQF6 201 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 TXNDC9O14530 226 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 VDRP11473 427 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 GLRA2P23416 452 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 PTGER2P43116 358 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 TAF1BQ53T94 588 aaPredicted RBP13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ITPRIPL1Q6GPH6 555 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ATXN7L3BQ96GX2 97 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 FAM84AQ96KN4 292 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZIM3Q96PE6 472 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 FUT8Q9BYC5 575 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
PCDHGB1-201ENST00000523390 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 BAG2O95816 211 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ADRB2P07550 413 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 AKAP5P24588 427 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ITGA8P53708 1063 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 NR1H3Q13133 447 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 SYDE1Q6ZW31 735 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 BRSK2Q8IWQ3 736 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 TMEM161BQ8NDZ6 487 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 OR6P1Q8NGX9 317 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZNF606Q8WXB4 792 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 RUBCNQ92622 972 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 SEPT5Q99719 369 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 NCAM1P13591 858 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ACADSBP45954 432 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 VEPH1Q14D04 833 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 IRF2BP1Q8IU81 584 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.72□□□□□ -0.211e-7■■■■■ 78
PCDHGB1-201ENST00000523390 ARHGEF26Q96DR7 871 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ZBTB24O43167 697 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 ONECUT3O60422 494 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 BEX3Q00994 111 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 KCNMA1Q12791 1236 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 RAB44Q7Z6P3 723 aaPredicted RBP13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 CD302Q8IX05 232 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 HASPINQ8TF76 798 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 VIPAS39Q9H9C1 493 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
PCDHGB1-201ENST00000523390 GMNCA6NCL1 334 aa13.71□□□□□ -0.21
PCDHGB1-201ENST00000523390 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms