RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 SFXN1Q9H9B4 322 aa24.24■■□□□ 1.47
SKP1-206ENST00000519321 FBXW11Q9UKB1 542 aa24.24■■□□□ 1.47
SKP1-206ENST00000519321 TSC2P49815 1807 aa24.24■■□□□ 1.47
SKP1-206ENST00000519321 H3BQ06 376 aaPredicted RBP24.23■■□□□ 1.47
SKP1-206ENST00000519321 ABLIM3O94929 683 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 ASS1P00966 412 aaKnown RBP24.23■■□□□ 1.47
SKP1-206ENST00000519321 ARPP19P56211 112 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 SOWAHAQ2M3V2 549 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 UVSSAQ2YD98 709 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 LIN9Q5TKA1 542 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 LIMS2Q7Z4I7 341 aa24.23■■□□□ 1.47
SKP1-206ENST00000519321 PLXNA3P51805 1871 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 TACC1O75410 805 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 ELF1P32519 619 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 TSPY1Q01534 308 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 ITIH3Q06033 890 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 CETN1Q12798 172 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 SMARCB1Q12824 385 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 GPR17Q13304 367 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 SMAD4Q13485 552 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 CCDC149Q6ZUS6 474 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 TRIM59Q8IWR1 403 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.22■■□□□ 1.47
SKP1-206ENST00000519321 CMASQ8NFW8 434 aaPredicted RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 ENOX1Q8TC92 643 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 TAS1R2Q8TE23 839 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 CNOT6LQ96LI5 555 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 ACBD6Q9BR61 282 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 NAT10Q9H0A0 1025 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 RAB20Q9NX57 234 aa24.22■■□□□ 1.47
SKP1-206ENST00000519321 DDX43Q9NXZ2 648 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 NXF1Q9UBU9 619 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 AFF4Q9UHB7 1163 aaKnown RBP24.22■■□□□ 1.47
SKP1-206ENST00000519321 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.22■■□□□ 1.47
SKP1-206ENST00000519321 WDR27A2RRH5 827 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 GABRDO14764 452 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 PMM2O15305 246 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 P4HA2O15460 535 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 ATF2P15336 505 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 WARSP23381 471 aaKnown RBP24.21■■□□□ 1.47
SKP1-206ENST00000519321 PCSK1P29120 753 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 TFF2Q03403 129 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 TYRO3Q06418 890 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 CES5AQ6NT32 575 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 CYP26C1Q6V0L0 522 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 DCP1BQ8IZD4 617 aaKnown RBP24.21■■□□□ 1.47
SKP1-206ENST00000519321 SMRP1Q8NCR6 262 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 FAXDC2Q96IV6 333 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 ZDHHC7Q9NXF8 308 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 MAGEC2Q9UBF1 373 aaPredicted RBP24.21■■□□□ 1.47
SKP1-206ENST00000519321 COQ4Q9Y3A0 265 aa24.21■■□□□ 1.47
SKP1-206ENST00000519321 MTCL1Q9Y4B5 1905 aaKnown RBP24.21■■□□□ 1.47
SKP1-206ENST00000519321 SPATA31D3P0C874 917 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 FMO5P49326 533 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 WDR44Q5JSH3 913 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 SYCE2Q6PIF2 218 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 SPATA31D4Q6ZUB0 917 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 RTP3Q9BQQ7 232 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 ZCWPW1Q9H0M4 648 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 ADAM7Q9H2U9 754 aa24.2■■□□□ 1.46
SKP1-206ENST00000519321 ZMYND10O75800 440 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 C8AP07357 584 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 HNRNPA1P09651 372 aaKnown RBP eCLIP24.19■■□□□ 1.46
SKP1-206ENST00000519321 NOP14P78316 857 aaKnown RBP24.19■■□□□ 1.46
SKP1-206ENST00000519321 CLUL1Q15846 466 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 CBWD6Q4V339 395 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 CBWD3Q5JTY5 395 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 CBWD5Q5RIA9 395 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 CREBRFQ8IUR6 639 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 TCEAL8Q8IYN2 117 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 OR10T2Q8NGX3 314 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.19■■□□□ 1.46
SKP1-206ENST00000519321 C2orf15Q8WU43 125 aaKnown RBP24.19■■□□□ 1.46
SKP1-206ENST00000519321 ASB2Q96Q27 587 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 RHOBTB2Q9BYZ6 727 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 S1PR5Q9H228 398 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 SNX25Q9H3E2 840 aa24.19■■□□□ 1.46
SKP1-206ENST00000519321 BRWD1Q9NSI6 2320 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 PRRG1O14668 218 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 MBTPS2O43462 519 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 AFPP02771 609 aaKnown RBP24.18■■□□□ 1.46
SKP1-206ENST00000519321 PRKCSHP14314 528 aaPredicted RBP24.18■■□□□ 1.46
SKP1-206ENST00000519321 HOXA9P31269 272 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 ADCY1Q08828 1119 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 KCNH2Q12809 1159 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 NFE2Q16621 373 aaPredicted RBP24.18■■□□□ 1.46
SKP1-206ENST00000519321 PPM1LQ5SGD2 360 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 RARS2Q5T160 578 aaKnown RBP24.18■■□□□ 1.46
SKP1-206ENST00000519321 PTCRAQ6ISU1 281 aaPredicted RBP24.18■■□□□ 1.46
SKP1-206ENST00000519321 OSTM1Q86WC4 334 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 IRF2BP1Q8IU81 584 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 KBTBD7Q8WVZ9 684 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 RIPOR3Q96MK2 946 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 HSFX1Q9UBD0 423 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 CDH9Q9ULB4 789 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 POLIQ9UNA4 740 aa24.18■■□□□ 1.46
SKP1-206ENST00000519321 PAPLNO95428 1278 aa24.17■■□□□ 1.46
SKP1-206ENST00000519321 OR4Q2P0C623 313 aa24.17■■□□□ 1.46
SKP1-206ENST00000519321 GNL1P36915 607 aaPredicted RBP24.17■■□□□ 1.46
SKP1-206ENST00000519321 MTIF2P46199 727 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms