RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 TMOD1P28289 359 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ADCYAP1R1P41586 468 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CCT5P48643 541 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 YWHAEP62258 255 aaKnown RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 LACTBP83111 547 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 PTK6Q13882 451 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 SLMAPQ14BN4 828 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 WDR72Q3MJ13 1102 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF667Q5HYK9 610 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CYP4A22Q5TCH4 519 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 SYDE1Q6ZW31 735 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 HOOK3Q86VS8 718 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 GRK7Q8WTQ7 553 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CPB2Q96IY4 423 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CCDC114Q96M63 670 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 FAM118BQ9BPY3 351 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 OSBPL8Q9BZF1 889 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 ZNF518BQ9C0D4 1074 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 KATNBL1Q9H079 304 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 PDZD7Q9H5P4 517 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.69□□□□□ -1.02
CPNE4-211ENST00000514439 WHRNQ9P202 907 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 SLC12A6Q9UHW9 1150 aa8.69□□□□□ -1.02
CPNE4-211ENST00000514439 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RBM47A0AV96 593 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 GLTPD2A6NH11 291 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 BTBD19C9JJ37 291 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 MAGEB2O15479 319 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CAND2O75155 1236 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 GAS8O95995 478 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 MCF2P10911 925 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RARGP13631 454 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CD19P15391 556 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 IVDP26440 423 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 MAGOHP61326 146 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 OGDHQ02218 1023 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 MKRN3Q13064 507 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 TRIP13Q15645 432 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ATP13A4Q4VNC1 1196 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ODF2Q5BJF6 829 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PPP1R15BQ5SWA1 713 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 JADE1Q6IE81 842 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 DENND1BQ6P3S1 775 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 DCUN1D2Q6PH85 259 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SRLQ86TD4 932 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CCDC25Q86WR0 208 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ERICH1Q86X53 443 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 IFNLR1Q8IU57 520 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ATL2Q8NHH9 583 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 TLCD1Q96CP7 247 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SNF8Q96H20 258 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 MS4A4AQ96JQ5 239 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SDCBP2Q9H190 292 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CEP83Q9Y592 693 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CCL15-CCL14A0A0B4J2E2 113 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 F8VP50 259 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PI4K2BG5E9Z4 385 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RIPK2O43353 540 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 KRT1P04264 644 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ITGB3P05106 788 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CETPP11597 493 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CDH8P55286 799 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PPP2R2AP63151 447 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 TNFAIP2Q03169 654 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PPARDQ03181 441 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 NFX1Q12986 1120 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ORC1Q13415 861 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CCNG2Q16589 344 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PTGISQ16647 500 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CCL15Q16663 113 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PTPN20Q4JDL3 420 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 CXorf38Q8TB03 319 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 PKNOX2Q96KN3 472 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SLITRK1Q96PX8 696 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 C16orf70Q9BSU1 422 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 EPN3Q9H201 632 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 SMYD3Q9H7B4 428 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 AAASQ9NRG9 546 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 HOMER3Q9NSC5 361 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 FEZ2Q9UHY8 353 aaPredicted RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 LCMT1Q9UIC8 334 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 RRP15Q9Y3B9 282 aaKnown RBP8.68□□□□□ -1.02
CPNE4-211ENST00000514439 IVNS1ABPQ9Y6Y0 642 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 COL1A2P08123 1366 aa8.68□□□□□ -1.02
CPNE4-211ENST00000514439 ANK1P16157 1881 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 EVPLQ92817 2033 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 SMIM23A6NLE4 172 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 NDUFAB1O14561 156 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ATF2P15336 505 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 ITIH2P19823 946 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 CHKAP35790 457 aa8.67□□□□□ -1.02
CPNE4-211ENST00000514439 VPS41P49754 854 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms