RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 PLEKP08567 350 aaPredicted RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 PNMA6AP0CW24 399 aaPredicted RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 WARSP23381 471 aaKnown RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 VAV2P52735 878 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 KIF5AQ12840 1032 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 ARHGAP29Q52LW3 1261 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 TOGARAM2Q6ZUX3 1019 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 LIMS2Q7Z4I7 341 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 SLC47A2Q86VL8 602 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 COLGALT2Q8IYK4 626 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 ADGRF2Q8IZF7 708 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 TRIM11Q96F44 468 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 TMEM176AQ96HP8 235 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 CALR3Q96L12 384 aaKnown RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 CASD1Q96PB1 797 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 SYT11Q9BT88 431 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 ZNF518BQ9C0D4 1074 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 RNF19AQ9NV58 838 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 SEPT11Q9NVA2 429 aaKnown RBP17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 STK39Q9UEW8 545 aa17.83■□□□□ 0.44
SCAMP1-203ENST00000510030 TBKBP1A7MCY6 615 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 PPEF2O14830 753 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 THAP12O43422 761 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 ZNF500O60304 480 aaPredicted RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 DGKIO75912 1065 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 ALDH2P05091 517 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 VDRP11473 427 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 WDR5P61964 334 aaKnown RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 MTF1Q14872 753 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 SOWAHAQ2M3V2 549 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 ALKBH5Q6P6C2 394 aaKnown RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 MSANTD4Q8NCY6 345 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 SENP8Q96LD8 212 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 NAGPAQ9UK23 515 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 COL6A3P12111 3177 aa17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 FNDC1Q4ZHG4 1894 aaPredicted RBP17.82■□□□□ 0.44
SCAMP1-203ENST00000510030 A0A087X0T9 212 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 A8MXQ7 604 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 M0QZQ0 153 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 FAM228BP0C875 321 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 TYMPP19971 482 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 ITGB8P26012 769 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 PCSK1P29120 753 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 GNL1P36915 607 aaPredicted RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 MAGEA1P43355 309 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 AFF1P51825 1210 aaKnown RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 NDST1P52848 882 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 GFPT1Q06210 699 aaPredicted RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 SGO2Q562F6 1265 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 GLYCTKQ8IVS8 523 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 CMTR2Q8IYT2 770 aaKnown RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 OR6B3Q8NGW1 331 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 SLC30A5Q8TAD4 765 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 SUSD3Q96L08 255 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 NOX5Q96PH1 765 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 OXCT2Q9BYC2 517 aaPredicted RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 SPTLC3Q9NUV7 552 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 PUF60Q9UHX1 559 aaKnown RBP17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 PCDHGC3Q9UN70 934 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 PCDHA13Q9Y5I0 950 aa17.81■□□□□ 0.44
SCAMP1-203ENST00000510030 SF3B1O75533 1304 aaKnown RBP eCLIP17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 SYN3O14994 580 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 SPTLC1O15269 473 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 RTN2O75298 545 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 CYP11A1P05108 521 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 CD19P15391 556 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 RAP1GAPP47736 663 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 OR1G1P47890 313 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 ALDH7A1P49419 539 aaKnown RBP17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 RAD23BP54727 409 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 SNX16P57768 344 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 IFI16Q16666 785 aaKnown RBP17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 THEM5Q8N1Q8 247 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 PDCL2Q8N4E4 241 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 ZNF606Q8WXB4 792 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 DDX1Q92499 740 aaKnown RBP17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 BADQ92934 168 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 SLC9A7Q96T83 725 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 DESI2Q9BSY9 194 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 MIS12Q9H081 205 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 MYO1AQ9UBC5 1043 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 PCDHB8Q9UN66 801 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 STXBP5LQ9Y2K9 1186 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 FAN1Q9Y2M0 1017 aa17.8■□□□□ 0.44
SCAMP1-203ENST00000510030 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 TADA2AO75478 443 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 DDHD2O94830 711 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 UPP2O95045 317 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 H2AFZP0C0S5 128 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 MYBL1P10243 752 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 NSFP46459 744 aaKnown RBP17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 CDH8P55286 799 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 SLC8A3P57103 927 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 FMO1Q01740 532 aa17.79■□□□□ 0.44
SCAMP1-203ENST00000510030 MAPRE1Q15691 268 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms