RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 GAREM2Q75VX8 874 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 DNAJB7Q7Z6W7 309 aaPredicted RBP13.82□□□□□ -0.2
RNF4-206ENST00000504782 STKLD1Q8NE28 680 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 CXorf38Q8TB03 319 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 NOC3LQ8WTT2 800 aaKnown RBP13.82□□□□□ -0.2
RNF4-206ENST00000504782 SMARCD2Q92925 531 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
RNF4-206ENST00000504782 SHDQ96IW2 340 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 LRRC3BQ96PB8 259 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 MKNK1Q9BUB5 465 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 OLFML3Q9NRN5 406 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 TMLHEQ9NVH6 421 aa13.82□□□□□ -0.2
RNF4-206ENST00000504782 KPNA7A9QM74 516 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 HCRTO43612 131 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 ATF6P18850 670 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 CASP1P29466 404 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 POLR2BP30876 1174 aaKnown RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 GDI1P31150 447 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 ALDH1A3P47895 512 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 EPHB3P54753 998 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 PFKPQ01813 784 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 PKP1Q13835 747 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 POSTNQ15063 836 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 CCDC142Q17RM4 750 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 LMBRD2Q68DH5 695 aaPredicted RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 ARMCX5Q6P1M9 558 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 BRSK2Q8IWQ3 736 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 SYCP3Q8IZU3 236 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 C1orf127Q8N9H9 656 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 SNX21Q969T3 373 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 SEPT5Q99719 369 aaPredicted RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 TRMT61BQ9BVS5 477 aaKnown RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 OXCT2Q9BYC2 517 aaPredicted RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 BRD9Q9H8M2 597 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 PDE11AQ9HCR9 933 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 AGAP1Q9UPQ3 857 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 EXOC7Q9UPT5 735 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 PCDHB13Q9Y5F0 798 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.81□□□□□ -0.2
RNF4-206ENST00000504782 PTPRJQ12913 1337 aa13.81□□□□□ -0.2
RNF4-206ENST00000504782 HEPACAM2A8MVW5 462 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 IL18RAPO95256 599 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 ITGB3P05106 788 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 PSMC3P17980 439 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 GPR15P49685 360 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 ZNF687Q8N1G0 1237 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 GIPC2Q8TF65 315 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 PSMG2Q969U7 264 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 DHX58Q96C10 678 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 SLITRK6Q9H5Y7 841 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 TRPV4Q9HBA0 871 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 IL21Q9HBE4 155 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 KBTBD4Q9NVX7 518 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 RBAKQ9NYW8 714 aaPredicted RBP13.8□□□□□ -0.2
RNF4-206ENST00000504782 SIX4Q9UIU6 781 aa13.8□□□□□ -0.2
RNF4-206ENST00000504782 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
RNF4-206ENST00000504782 CFAP54Q96N23 3096 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 ARNTLO00327 626 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 EXTL3O43909 919 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 PPP6R2O75170 966 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 GARTP22102 1010 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 ACAT1P24752 427 aaKnown RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 GABRR2P28476 465 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 CYP4F8P98187 520 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 POU5F1Q01860 360 aaKnown RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 PLD1Q13393 1074 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 MGAT5BQ3V5L5 792 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 SDHAF4Q5VUM1 108 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 TSSK4Q6SA08 328 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 METTL23Q86XA0 190 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 ARID3BQ8IVW6 561 aaPredicted RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 MFSD6LQ8IWD5 586 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 CSGALNACT2Q8N6G5 542 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 LEMD2Q8NC56 503 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 OR5B17Q8NGF7 314 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 CLDN23Q96B33 292 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 ZFYVE19Q96K21 471 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 TRIM9Q9C026 710 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 MTMR12Q9C0I1 747 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 SMG9Q9H0W8 520 aaKnown RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 SPATA6Q9NWH7 488 aaPredicted RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 DSEQ9UL01 958 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 L1RE1Q9UN81 338 aa13.79□□□□□ -0.2
RNF4-206ENST00000504782 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
RNF4-206ENST00000504782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.78□□□□□ -0.2
RNF4-206ENST00000504782 HAPLN1P10915 354 aaPredicted RBP13.78□□□□□ -0.2
RNF4-206ENST00000504782 PAX3P23760 479 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 SOX9P48436 509 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 SV2CQ496J9 727 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 WDR44Q5JSH3 913 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 GPR158Q5T848 1215 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 ZNF852Q6ZMS4 543 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
RNF4-206ENST00000504782 NT5DC4Q86YG4 428 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms