RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 ZNF233A6NK53 670 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 STK25O00506 426 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 EIF3DO15371 548 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS52-221ENST00000495755 TGFB1I1O43294 461 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ITGB3P05106 788 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 MYL4P12829 197 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 CASP1P29466 404 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 POLR2BP30876 1174 aaKnown RBP7.78□□□□□ -1.16
VPS52-221ENST00000495755 PNPLA4P41247 253 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ALDH1A3P47895 512 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 TFAMQ00059 246 aaKnown RBP7.78□□□□□ -1.16
VPS52-221ENST00000495755 PFKPQ01813 784 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 PRKCQQ04759 706 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SNW1Q13573 536 aaKnown RBP7.78□□□□□ -1.16
VPS52-221ENST00000495755 SV2CQ496J9 727 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SLC44A4Q53GD3 710 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 FAM26FQ5R3K3 315 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 UNC13DQ70J99 1090 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 DNAJB7Q7Z6W7 309 aaPredicted RBP7.78□□□□□ -1.16
VPS52-221ENST00000495755 METTL23Q86XA0 190 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 THEM5Q8N1Q8 247 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 GPD1LQ8N335 351 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 PDCL2Q8N4E4 241 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 CSGALNACT2Q8N6G5 542 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 TTC9BQ8N6N2 239 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SHKBP1Q8TBC3 707 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 CACTINQ8WUQ7 758 aaKnown RBP7.78□□□□□ -1.16
VPS52-221ENST00000495755 SCFD1Q8WVM8 642 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SMARCD2Q92925 531 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 PSMG2Q969U7 264 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SHDQ96IW2 340 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 FAM84AQ96KN4 292 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ZNF560Q96MR9 790 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ASB16Q96NS5 453 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 GPR88Q9GZN0 384 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 TRPV4Q9HBA0 871 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 PDE11AQ9HCR9 933 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ASAH2Q9NR71 780 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 AGPAT3Q9NRZ7 376 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 FAM86C1Q9NVL1 165 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 GDAP2Q9NXN4 497 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 FAM13BQ9NYF5 915 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SIX4Q9UIU6 781 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 ITGA11Q9UKX5 1188 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 AGAP1Q9UPQ3 857 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SIT1Q9Y3P8 196 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SCN1AP35498 2009 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 PTPRJQ12913 1337 aa7.78□□□□□ -1.16
VPS52-221ENST00000495755 SHISA7A6NL88 538 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 PROB1E7EW31 1015 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 KLRC4O43908 158 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 SOAT2O75908 522 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 SLFN14P0C7P3 912 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 HAPLN1P10915 354 aaPredicted RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 GJA1P17302 382 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 CMA1P23946 247 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 NBL1P41271 181 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 VIPR2P41587 438 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 TUFMP49411 452 aaKnown RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 SNRPFP62306 86 aaKnown RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 RBP5P82980 135 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 SMARCB1Q12824 385 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 CUL4BQ13620 913 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 SURF1Q15526 300 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 TEAD2Q15562 447 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 MLF2Q15773 248 aaPredicted RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 BMT2Q1RMZ1 405 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 LIMS2Q7Z4I7 341 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 CBWD2Q8IUF1 395 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 PJA1Q8NG27 643 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 OR5B17Q8NGF7 314 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 ZSCAN18Q8TBC5 510 aaPredicted RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 C2orf15Q8WU43 125 aaKnown RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 FOXQ1Q9C009 403 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 BLZF1Q9H2G9 400 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 KIAA1586Q9HCI6 787 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 ZFP14Q9HCL3 533 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 ZNF334Q9HCZ1 680 aaPredicted RBP7.77□□□□□ -1.17
VPS52-221ENST00000495755 TMLHEQ9NVH6 421 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 INTS13Q9NVM9 706 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 HSPBP1Q9NZL4 362 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 SERTAD1Q9UHV2 236 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 L1RE1Q9UN81 338 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 HPSEQ9Y251 543 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 UBE4BO95155 1302 aa7.77□□□□□ -1.17
VPS52-221ENST00000495755 TSC2P49815 1807 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 FAM237AA0A1B0GTK4 181 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 A0A1W2PRU2 124 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 KANSL1LA0AUZ9 987 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
VPS52-221ENST00000495755 GABRDO14764 452 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 ACTN4O43707 911 aaKnown RBP7.76□□□□□ -1.17
VPS52-221ENST00000495755 HUS1O60921 280 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 LRRN2O75325 713 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 FGF19O95750 216 aa7.76□□□□□ -1.17
VPS52-221ENST00000495755 DCNP07585 359 aaKnown RBP7.76□□□□□ -1.17
VPS52-221ENST00000495755 GLULP15104 373 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms