RNA–Protein interactions for RNA: ENST00000495368.1

SEC61A2-214, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 2,311 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-214ENST00000495368 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 CNTN3Q9P232 1028 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 CYTH4Q9UIA0 394 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 ZSCAN5CA6NGD5 496 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 KRIT1O00522 736 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 HMGCRP04035 888 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 MMP8P22894 467 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 SOX4Q06945 474 aaPredicted RBP17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 PTGISQ16647 500 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 CD101Q93033 1021 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 TMEM176AQ96HP8 235 aa17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 HEXIM2Q96MH2 286 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 MRPL45Q9BRJ2 306 aaKnown RBP17.12■□□□□ 0.33
SEC61A2-214ENST00000495368 HTTP42858 3142 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 TLR3O15455 904 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 PEX5P50542 639 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 C1QBPQ07021 282 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 MYO1EQ12965 1108 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 CCDC70Q6NSX1 233 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 WDR93Q6P2C0 686 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 UBL4BQ8N7F7 174 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 ZFP42Q96MM3 310 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 GDAP1L1Q96MZ0 367 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 LPIN3Q9BQK8 851 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 DDX47Q9H0S4 455 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 CACNG4Q9UBN1 327 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 TMEM59LQ9UK28 342 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 DERAQ9Y315 318 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 SCN1AP35498 2009 aa17.11■□□□□ 0.33
SEC61A2-214ENST00000495368 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 HCRTO43612 131 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 SASH3O75995 380 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 RPL7AP62424 266 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 UBA3Q8TBC4 463 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 SENP6Q9GZR1 1112 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 USTQ9Y2C2 406 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 MIF4GDA9UHW6 222 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 MYO1FO00160 1098 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 O00370 1275 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 PAEPP09466 180 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 PYGMP11217 842 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 HOXD10P28358 340 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 NKX3-2P78367 333 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 PLEKHA7Q6IQ23 1121 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 ERICH1Q86X53 443 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 C12orf29Q8N999 325 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 LPPQ93052 612 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 CALR3Q96L12 384 aaKnown RBP17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 WNT8AQ9H1J5 351 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 NME7Q9Y5B8 376 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 CASP8AP2Q9UKL3 1982 aa17.1■□□□□ 0.33
SEC61A2-214ENST00000495368 ESYT3A0FGR9 886 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 GOLGA8SH3BPF8 625 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 RAD51CO43502 376 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 MICAL2O94851 1124 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 LSM8O95777 96 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 GLI1P08151 1106 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 REM2Q8IYK8 340 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 CARD9Q9H257 536 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 BARX2Q9UMQ3 279 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 UBQLN1Q9UMX0 589 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 RALGAPA2Q2PPJ7 1873 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 PIK3R2O00459 728 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 SPTLC1O15269 473 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 ERLIN1O75477 346 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 GHRP10912 638 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 CYP3A5P20815 502 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 IGFBP6P24592 240 aaPredicted RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 CTNNA1P35221 906 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 GJC1P36383 396 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 MGAT3Q09327 533 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 PTPN20Q4JDL3 420 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 ACOT1Q86TX2 421 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 VCPIP1Q96JH7 1222 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 ERVK-5Q9HDB9 667 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 PARVAQ9NVD7 372 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 CEP83Q9Y592 693 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 PCDHA3Q9Y5H8 950 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 THSD7BQ9C0I4 1608 aa17.09■□□□□ 0.33
SEC61A2-214ENST00000495368 M0QYV0 167 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 MED7O43513 233 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 HEXIM1O94992 359 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 STAU1O95793 577 aaKnown RBP17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 CD52P31358 61 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 CDR1P51861 262 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 ACLYP53396 1101 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 ITGA7Q13683 1181 aa17.08■□□□□ 0.33
SEC61A2-214ENST00000495368 TRADDQ15628 312 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms