RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 ACTRT1Q8TDG2 376 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 CYFIP2Q96F07 1278 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 MS4A14Q96JA4 679 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 SNX27Q96L92 541 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 ZIM3Q96PE6 472 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 RPS6KC1Q96S38 1066 aa19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 NXF1Q9UBU9 619 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 CNOT8Q9UFF9 292 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 TRIP12Q14669 1992 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-212ENST00000494815 FAM170AA1A519 330 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 MIF4GDA9UHW6 222 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 ATMINO43313 823 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 LSM8O95777 96 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 RBP5P82980 135 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 SCARA5Q6ZMJ2 495 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 KIF12Q96FN5 646 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 EIF2AQ9BY44 585 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 TRIM6Q9C030 488 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 CYP3A43Q9HB55 503 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 RBM12Q9NTZ6 932 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 PIN4Q9Y237 131 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 ALG6Q9Y672 507 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 PCNTO95613 3336 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 RPLP2P05387 115 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 POLR2BP30876 1174 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 CAP1Q01518 475 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 TRIM32Q13049 653 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 NBPF20Q3BBV1 942 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 MON1BQ7L1V2 547 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 PHF13Q86YI8 300 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 IFT20Q8IY31 132 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 CPA5Q8WXQ8 436 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 RABEP2Q9H5N1 569 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 XPNPEP3Q9NQH7 507 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 SNTG2Q9NY99 539 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 POLIQ9UNA4 740 aa19.68■□□□□ 0.74
TSPAN4-212ENST00000494815 PRKAR2AP13861 404 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 HOXD10P28358 340 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 TTC19Q6DKK2 380 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 B4GALNT4Q76KP1 1039 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 HPDLQ96IR7 371 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 CELF4Q9BZC1 486 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 GDF3Q9NR23 364 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 RNF186Q9NXI6 227 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 RALGAPA2Q2PPJ7 1873 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 PTPROQ16827 1216 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 SWT1Q5T5J6 900 aaKnown RBP19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 RSPH3Q86UC2 560 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 RASGEF1CQ8N431 466 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 USP38Q8NB14 1042 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 TSPAN18Q96SJ8 248 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 CARD9Q9H257 536 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 SRRDQ9UH36 339 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 PCDHGC3Q9UN70 934 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 AGAP1Q9UPQ3 857 aa19.67■□□□□ 0.74
TSPAN4-212ENST00000494815 M0QZ92 97 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 NDUFAB1O14561 156 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 DDX3YO15523 660 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 CEP104O60308 925 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 CFHP08603 1231 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 PAEPP09466 180 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 CST5P28325 142 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 MRPS6P82932 125 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 C1QBPQ07021 282 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 PDCLQ13371 301 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 LIN9Q5TKA1 542 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 SESTD1Q86VW0 696 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 SPATS2Q86XZ4 545 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 TTC39CQ8N584 583 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 ZNF518BQ9C0D4 1074 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 CNTN3Q9P232 1028 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 CHORDC1Q9UHD1 332 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 TTC7AQ9ULT0 858 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 PGRMC1O00264 195 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 ZBTB6Q15916 424 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 ALKAL1Q6UXT8 129 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 KDM7AQ6ZMT4 941 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 PASD1Q8IV76 773 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 KLHDC9Q8NEP7 349 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.742e-12■□□□□ 9.2
TSPAN4-212ENST00000494815 NXF3Q9H4D5 531 aaKnown RBP19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 ADAM22Q9P0K1 906 aa19.66■□□□□ 0.74
TSPAN4-212ENST00000494815 ELNP15502 786 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 RRM1P23921 792 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 CCND3P30281 292 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 PAK2Q13177 524 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 MESDQ14696 234 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 ZNF394Q53GI3 561 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 GDF6Q6KF10 455 aaPredicted RBP19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 RPAINQ86UA6 219 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 SERINC5Q86VE9 423 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 IQCKQ8N0W5 287 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 MREGQ8N565 214 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 UBL4BQ8N7F7 174 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 TMEM59LQ9UK28 342 aa19.65■□□□□ 0.74
TSPAN4-212ENST00000494815 RECQL4O94761 1208 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 HMGCRP04035 888 aa19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 CDH5P33151 784 aaPredicted RBP19.64■□□□□ 0.74
TSPAN4-212ENST00000494815 MYO1EQ12965 1108 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms