RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 CPA4Q9UI42 421 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 MSRAQ9UJ68 235 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 SLC45A1Q9Y2W3 748 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 ASB1Q9Y576 335 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 CFAP54Q96N23 3096 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 PHIPQ8WWQ0 1821 aa7.17□□□□□ -1.26
RTFDC1-209ENST00000487211 MAST4O15021 2626 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 ANKRD11Q6UB99 2663 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 DOCK1Q14185 1865 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 FASNP49327 2511 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 GOLGA8AA7E2F4 631 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 GOLGA8BA8MQT2 603 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 FBXO21O94952 628 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 NDUFB10O96000 172 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 MT-CO1P00395 513 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 NCAM1P13591 858 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 MCCP23508 829 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 AOAHP28039 575 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 CTGFP29279 349 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 IRAK1P51617 712 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 KLF1Q13351 362 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 CR1LQ2VPA4 569 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 CD276Q5ZPR3 534 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 PRR23BQ6ZRT6 265 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 RASGRP2Q7LDG7 609 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 ZBTB46Q86UZ6 589 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 DGKHQ86XP1 1220 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 CMIPQ8IY22 773 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 RAVER1Q8IY67 606 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 MB21D2Q8IYB1 491 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 NCOA7Q8NI08 942 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 IGDCC4Q8TDY8 1250 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 ANKS1AQ92625 1134 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 TTC14Q96N46 770 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 NUP88Q99567 741 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 KRT23Q9C075 422 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 SLC39A2Q9NP94 309 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 NGRNQ9NPE2 291 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 STX8Q9UNK0 236 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 SNX14Q9Y5W7 946 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 ADGRA2Q96PE1 1338 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 PLIN4Q96Q06 1357 aa7.16□□□□□ -1.26
RTFDC1-209ENST00000487211 GOLGA6L22H0YM25 854 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CNMDO75829 334 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 REC8O95072 547 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 PARNO95453 639 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 TOP1P11387 765 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CPA1P15085 419 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 MC4RP32245 332 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 MC3RP41968 323 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 EPHB1P54762 984 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 NCKAP1LP55160 1127 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 SP3Q02447 781 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 MCL1Q07820 350 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CACNB2Q08289 660 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 TRDNQ13061 729 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 COG2Q14746 738 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 PDCD1Q15116 288 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 FAM83BQ5T0W9 1011 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 SLFN13Q68D06 897 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 RTN4RL1Q86UN2 441 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CILP2Q8IUL8 1156 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CBARPQ8N350 705 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 DEFB123Q8N688 67 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 ANKRD13CQ8N6S4 541 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 C7orf31Q8N865 590 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 ENAHQ8N8S7 591 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 GMCL1P1Q8NEA9 526 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 LPAR1Q92633 364 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 E2F7Q96AV8 911 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 FOXRED1Q96CU9 486 aaPredicted RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 TXNRD2Q9NNW7 524 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 FBXO28Q9NVF7 368 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 UCKL1Q9NWZ5 548 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 HSPBP1Q9NZL4 362 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 BTBD7Q9P203 1132 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 USP36Q9P275 1121 aaKnown RBP7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 TCEAL9Q9UHQ7 104 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 SYNPO2Q9UMS6 1093 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 SPEF1Q9Y4P9 236 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 TNKSO95271 1327 aa7.15□□□□□ -1.26
RTFDC1-209ENST00000487211 CFAP47Q6ZTR5 3102 aa7.15□□□□□ -1.27
RTFDC1-209ENST00000487211 UBA6A0AVT1 1052 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 IFIT3O14879 490 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 WDR46O15213 610 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 EPB41L2O43491 1005 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 PRC1O43663 620 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 C8BP07358 591 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 ENO2P09104 434 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 EN2P19622 333 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 PTGS1P23219 599 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 NT5C2P49902 561 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 IRX3P78415 501 aaPredicted RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 PFKPQ01813 784 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 TARBP2Q15633 366 aaKnown RBP7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 PTPN21Q16825 1174 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 TTC38Q5R3I4 469 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 VASNQ6EMK4 673 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 TMC5Q6UXY8 1006 aa7.14□□□□□ -1.27
RTFDC1-209ENST00000487211 IQCA1Q86XH1 822 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms