RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KLHL5Q96PQ7 755 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 PIGSQ96S52 555 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 MIPEPQ99797 713 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 DDX23Q9BUQ8 820 aaKnown RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 RHOBTB2Q9BYZ6 727 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 HELLSQ9NRZ9 838 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 MAD2L2Q9UI95 211 aa7.49□□□□□ -1.21
SMC4-217ENST00000485867 MTF2Q9Y483 593 aaPredicted RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 GCN1Q92616 2671 aaKnown RBP7.49□□□□□ -1.21
SMC4-217ENST00000485867 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 B4E1Z4 1266 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 ZC3H11AO75152 810 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMC4-217ENST00000485867 CNPP09543 421 aaKnown RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 KLRC2P26717 231 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 MAGEA9P43362 315 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 NT5C2P49902 561 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 CRYBB1P53674 252 aaPredicted RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 UBXN2BQ14CS0 331 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 LPAL2Q16609 132 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 LAIR1Q6GTX8 287 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 TSSK4Q6SA08 328 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 CYP26C1Q6V0L0 522 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 PLPPR4Q7Z2D5 763 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 MFSD4AQ8N468 514 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 DDX1Q92499 740 aaKnown RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 IGSF21Q96ID5 467 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 VN1R3Q9BXE9 311 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 MRPL9Q9BYD2 267 aaKnown RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 OSBPL6Q9BZF3 934 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 AZI2Q9H6S1 392 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 RIOX1Q9H6W3 641 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 ATP13A1Q9HD20 1204 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 PRMT8Q9NR22 394 aaPredicted RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 MAN1C1Q9NR34 630 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 TPX2Q9ULW0 747 aaKnown RBP7.48□□□□□ -1.21
SMC4-217ENST00000485867 CAPN6Q9Y6Q1 641 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 NUMBLQ9Y6R0 609 aa7.48□□□□□ -1.21
SMC4-217ENST00000485867 COL1A2P08123 1366 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 MAST4O15021 2626 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 CCDC195A0A1B0GUA6 201 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 INPPL1O15357 1258 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 CYTH3O43739 400 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 GPR32O75388 356 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 RETP07949 1114 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 LAMP2P13473 410 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 EIF4BP23588 611 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 STAT5BP51692 787 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 ETF1P62495 437 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 RPS26P62854 115 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 GPC5P78333 572 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 SNW1Q13573 536 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 MLF2Q15773 248 aaPredicted RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 MCMDC2Q4G0Z9 681 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 SFRP5Q5T4F7 317 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 FYB2Q5VWT5 728 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 LETMD1Q6P1Q0 360 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 USP17L6PQ6QN14 398 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 HID1Q8IV36 788 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 KSR1Q8IVT5 923 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 ST13P5Q8NFI4 369 aaPredicted RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 SMARCC2Q8TAQ2 1214 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 RIN3Q8TB24 985 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 SMG7Q92540 1137 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 CLDN23Q96B33 292 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 RPP25Q9BUL9 199 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 FAM126AQ9BYI3 521 aaPredicted RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 DCTPP1Q9H773 170 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 NRDE2Q9H7Z3 1164 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 CARS2Q9HA77 564 aaKnown RBP7.47□□□□□ -1.21
SMC4-217ENST00000485867 LTB4R2Q9NPC1 389 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 SEMA4GQ9NTN9 838 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 SLC9A2Q9UBY0 812 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 RAB23Q9ULC3 237 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 ST14Q9Y5Y6 855 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 UBIAD1Q9Y5Z9 338 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 NOTCH4Q99466 2003 aa7.47□□□□□ -1.21
SMC4-217ENST00000485867 NAV2Q8IVL1 2488 aa7.46□□□□□ -1.21
SMC4-217ENST00000485867 HELZ2Q9BYK8 2649 aaKnown RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 A0A0U1RQF3 1178 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 LRRC10BA6NIK2 292 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 GFRA2O00451 464 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 MEIS2O14770 477 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 HBP1O60381 514 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 RFPL2O75678 378 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 VTNP04004 478 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMC4-217ENST00000485867 GALTP07902 379 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 C1QTNF9P0C862 333 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 TDGF1P13385 188 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
SMC4-217ENST00000485867 ACTR2P61160 394 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 FGD1P98174 961 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 MTMR1Q13613 665 aa7.46□□□□□ -1.22
SMC4-217ENST00000485867 GRM4Q14833 912 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms