RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 RPA1P27694 616 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 GPR17Q13304 367 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 PTPAQ15257 358 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 SEZ6Q53EL9 994 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 NAIF1Q69YI7 327 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-212ENST00000479586 TRIM68Q6AZZ1 485 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 ABCA7Q8IZY2 2146 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 FAM83CQ9BQN1 747 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 TMEM9BQ9NQ34 198 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 PDRG1Q9NUG6 133 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 THG1LQ9NWX6 298 aaKnown RBP18.9■□□□□ 0.62
HMGN1-212ENST00000479586 ASB3Q9Y575 518 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 LOC400499M0QZD8 3231 aa18.9■□□□□ 0.62
HMGN1-212ENST00000479586 OR6C75A6NL08 312 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 CDX4O14627 284 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-212ENST00000479586 REC8O95072 547 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 FGF19O95750 216 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 FDPSP14324 419 aaKnown RBP18.89■□□□□ 0.61
HMGN1-212ENST00000479586 WEE1P30291 646 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 NPTX2P47972 431 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 PEX3P56589 373 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 RUNX3Q13761 415 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 KARSQ15046 597 aaKnown RBP18.89■□□□□ 0.61
HMGN1-212ENST00000479586 SLC10A6Q3KNW5 377 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 MPZL3Q6UWV2 235 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 DEFB124Q8NES8 71 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 ZBTB45Q96K62 511 aaPredicted RBP18.89■□□□□ 0.61
HMGN1-212ENST00000479586 LPIN3Q9BQK8 851 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 TCHPQ9BT92 498 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 BHMT2Q9H2M3 363 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 EBF3Q9H4W6 596 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 INVSQ9Y283 1065 aa18.89■□□□□ 0.61
HMGN1-212ENST00000479586 SMG1Q96Q15 3661 aaKnown RBP18.89■□□□□ 0.61
HMGN1-212ENST00000479586 ASCC3Q8N3C0 2202 aaKnown RBP18.88■□□□□ 0.61
HMGN1-212ENST00000479586 CACNA1EQ15878 2313 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 PATE3B3GLJ2 98 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 PFKFB2O60825 505 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 APBB3O95704 486 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 U2AF2P26368 475 aaKnown RBP eCLIP18.88■□□□□ 0.611e-5■□□□□ 9.3
HMGN1-212ENST00000479586 GBP1P32455 592 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 MCM7P33993 719 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 CDR1P51861 262 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 FOSBP53539 338 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 SPAG1Q07617 926 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 ECM1Q16610 540 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 USP37Q86T82 979 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 ITIH5Q86UX2 942 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 RPLP0P6Q8NHW5 317 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 ERMNQ8TAM6 284 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 WASF1Q92558 559 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 SLC46A2Q9BY10 475 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 OXCT2Q9BYC2 517 aaPredicted RBP18.88■□□□□ 0.61
HMGN1-212ENST00000479586 TM6SF1Q9BZW5 370 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 IL21Q9HBE4 155 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 ARHGAP28Q9P2N2 729 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 CCL26Q9Y258 94 aa18.88■□□□□ 0.61
HMGN1-212ENST00000479586 KHNYNO15037 678 aaKnown RBP18.87■□□□□ 0.61
HMGN1-212ENST00000479586 HYAL3O43820 417 aaPredicted RBP18.87■□□□□ 0.61
HMGN1-212ENST00000479586 LARGE1O95461 756 aa18.87■□□□□ 0.61
HMGN1-212ENST00000479586 ARSAP15289 507 aa18.87■□□□□ 0.61
HMGN1-212ENST00000479586 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
HMGN1-212ENST00000479586 UAP1L1Q3KQV9 507 aa18.87■□□□□ 0.61
HMGN1-212ENST00000479586 DIS3L2Q8IYB7 885 aaKnown RBP18.87■□□□□ 0.61
HMGN1-212ENST00000479586 DAW1Q8N136 415 aa18.87■□□□□ 0.61
HMGN1-212ENST00000479586 TMEM134Q9H6X4 195 aa18.87■□□□□ 0.61
HMGN1-212ENST00000479586 CXCL8P10145 99 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 GALK1P51570 392 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 MYBPC2Q14324 1141 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 DMC1Q14565 340 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 PMS2CLQ68D20 193 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 OVOS1Q6IE37 1185 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 SYT13Q7L8C5 426 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 GCNAQ96QF7 691 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 SEPT5Q99719 369 aaPredicted RBP18.86■□□□□ 0.61
HMGN1-212ENST00000479586 ANKFY1Q9P2R3 1169 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 EBF1Q9UH73 591 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 NEUROG3Q9Y4Z2 214 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 THADAQ6YHU6 1953 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 KIAA1549LQ6ZVL6 1849 aa18.86■□□□□ 0.61
HMGN1-212ENST00000479586 TAF4O00268 1085 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 ATF6P18850 670 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 DRD1P21728 446 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 CDC25CP30307 473 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 LRPAP1P30533 357 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 GUCY2FP51841 1108 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 DGKEP52429 567 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 IRX4P78413 519 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 DSTYKQ6XUX3 929 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 CMTM8Q8IZV2 173 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 EZH1Q92800 747 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-212ENST00000479586 USP13Q92995 863 aaPredicted RBP18.85■□□□□ 0.61
HMGN1-212ENST00000479586 KMT5AQ9NQR1 393 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 KLK13Q9UKR3 277 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 MYO16Q9Y6X6 1858 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 IGSF10Q6WRI0 2623 aa18.85■□□□□ 0.61
HMGN1-212ENST00000479586 HIP1RO75146 1068 aa18.84■□□□□ 0.61
HMGN1-212ENST00000479586 BCKDHBP21953 392 aa18.84■□□□□ 0.61
HMGN1-212ENST00000479586 CCT6AP40227 531 aaKnown RBP18.84■□□□□ 0.61
HMGN1-212ENST00000479586 DMP1Q13316 513 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms