RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 GUCY1B3Q02153 619 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 SPAG1Q07617 926 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 PSAPL1Q6NUJ1 521 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 ITIH5Q86UX2 942 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 ATAD1Q8NBU5 361 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 ZC3H10Q96K80 434 aaKnown RBP17.3■□□□□ 0.36
ITGB1-211ENST00000475184 RUSC1Q9BVN2 902 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 VPS45Q9NRW7 570 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 THG1LQ9NWX6 298 aaKnown RBP17.3■□□□□ 0.36
ITGB1-211ENST00000475184 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 SLC8A2Q9UPR5 921 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 GON4LQ3T8J9 2241 aa17.3■□□□□ 0.36
ITGB1-211ENST00000475184 ATG13O75143 517 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 SOAT2O75908 522 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 CYP4F8P98187 520 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 GRSF1Q12849 480 aaKnown RBP eCLIP17.29■□□□□ 0.36
ITGB1-211ENST00000475184 STRN3Q13033 797 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 MAPK7Q13164 816 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 MYBPC2Q14324 1141 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 PTPAQ15257 358 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 OVOS1Q6IE37 1185 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 DSTYKQ6XUX3 929 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 SNX29Q8TEQ0 813 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 KIF12Q96FN5 646 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 C17orf75Q9HAS0 396 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 PLEKHA5Q9HAU0 1116 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
ITGB1-211ENST00000475184 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
ITGB1-211ENST00000475184 NBEAQ8NFP9 2946 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 E9PMD0 336 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 TCEAL6Q6IPX3 200 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 FSTL4Q6MZW2 842 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 UNQ6494/PRO21346Q6UXR6 183 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 TCEAL3Q969E4 200 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 GCNAQ96QF7 691 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 SMG9Q9H0W8 520 aaKnown RBP17.28■□□□□ 0.36
ITGB1-211ENST00000475184 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
ITGB1-211ENST00000475184 HSFX1Q9UBD0 423 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 UBQLN1Q9UMX0 589 aaKnown RBP17.28■□□□□ 0.36
ITGB1-211ENST00000475184 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 CACNA1EQ15878 2313 aa17.28■□□□□ 0.36
ITGB1-211ENST00000475184 TTC26A0AVF1 554 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 C1QTNF9BB2RNN3 333 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 CLDN3O15551 220 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 CLTAP09496 248 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 C1QTNF9P0C862 333 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 TYMPP19971 482 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 CYP3A5P20815 502 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 CDC25CP30307 473 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 NOVA1P51513 510 aaKnown RBP17.27■□□□□ 0.36
ITGB1-211ENST00000475184 ANAPC15P60006 121 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 MCL1Q07820 350 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 VEPH1Q14D04 833 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 PLK5Q496M5 336 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 RINT1Q6NUQ1 792 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 ARMCX5Q6P1M9 558 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 ZPBP2Q6X784 338 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 C1orf186Q6ZWK4 172 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 CAMKK1Q8N5S9 505 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 NTPCRQ9BSD7 190 aaKnown RBP17.27■□□□□ 0.36
ITGB1-211ENST00000475184 EDEM2Q9BV94 578 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
ITGB1-211ENST00000475184 GKN1Q9NS71 199 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 STK24Q9Y6E0 443 aa17.27■□□□□ 0.36
ITGB1-211ENST00000475184 SFI1A8K8P3 1242 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 TRDMT1O14717 391 aaKnown RBP17.26■□□□□ 0.35
ITGB1-211ENST00000475184 RNF40O75150 1001 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 ODC1P11926 461 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 MATR3P43243 847 aaKnown RBP eCLIP17.26■□□□□ 0.351e-6■■■■□ 21.4
ITGB1-211ENST00000475184 GUCY2FP51841 1108 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 PPP2R3AQ06190 1150 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 RUNX3Q13761 415 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 COL9A2Q14055 689 aaPredicted RBP17.26■□□□□ 0.35
ITGB1-211ENST00000475184 PDIA5Q14554 519 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 ELF2Q15723 593 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 C4orf32Q8N8J7 132 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 SPIRE2Q8WWL2 714 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 CHFRQ96EP1 664 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 HHIPQ96QV1 700 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 SEPT5Q99719 369 aaPredicted RBP17.26■□□□□ 0.35
ITGB1-211ENST00000475184 FAM83CQ9BQN1 747 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 SLC46A2Q9BY10 475 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 DUSP15Q9H1R2 295 aaPredicted RBP17.26■□□□□ 0.35
ITGB1-211ENST00000475184 IL21Q9HBE4 155 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 HPS4Q9NQG7 708 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 ZMIZ1Q9ULJ6 1067 aa17.26■□□□□ 0.35
ITGB1-211ENST00000475184 PTPRDP23468 1912 aa17.25■□□□□ 0.35
ITGB1-211ENST00000475184 OTOL1A6NHN0 477 aaPredicted RBP17.25■□□□□ 0.35
ITGB1-211ENST00000475184 GIPC1O14908 333 aa17.25■□□□□ 0.35
ITGB1-211ENST00000475184 XPOTO43592 962 aaKnown RBP17.25■□□□□ 0.35
ITGB1-211ENST00000475184 EGFP01133 1207 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms