RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 MRPL45Q9BRJ2 306 aaKnown RBP7.56□□□□□ -1.2
PMPCB-207ENST00000469560 DESI2Q9BSY9 194 aa7.56□□□□□ -1.2
PMPCB-207ENST00000469560 NUP58Q9BVL2 599 aa7.56□□□□□ -1.2
PMPCB-207ENST00000469560 TBC1D13Q9NVG8 400 aa7.56□□□□□ -1.2
PMPCB-207ENST00000469560 TSC2P49815 1807 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 TDRD15B5MCY1 1934 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 A0A087X0T9 212 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 CASTOR2A6NHX0 329 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 STX10O60499 249 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 N4BP1O75113 896 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ARHGEF15O94989 841 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 STAU1O95793 577 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 EOMESO95936 686 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 EFEMP2O95967 443 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 TPM3P06753 285 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 KRT19P08727 400 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 FAM228BP0C875 321 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 LMO2P25791 158 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 PBX3P40426 434 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 PRKCIP41743 596 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 BRCC3P46736 316 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 CDR1P51861 262 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 AP3M2P53677 418 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 LILRA4P59901 499 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 GCNT1Q02742 428 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ARID5AQ03989 594 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 RAPGEF1Q13905 1077 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 UPP1Q16831 310 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 PAN2Q504Q3 1202 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 CRTC2Q53ET0 693 aaPredicted RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 CNKSR3Q6P9H4 555 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 SCARA5Q6ZMJ2 495 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 PPFIBP1Q86W92 1011 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 CD302Q8IX05 232 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 REXO1L1PQ8IX06 675 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 COLGALT2Q8IYK4 626 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 C7orf61Q8IZ16 206 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ACRBPQ8NEB7 543 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 KIAA1524Q8TCG1 905 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ZNF689Q96CS4 500 aaPredicted RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 HPDLQ96IR7 371 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 BAG1Q99933 345 aaPredicted RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 VN1R3Q9BXE9 311 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ELOVL4Q9GZR5 314 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 HAUS4Q9H6D7 363 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 SPTLC3Q9NUV7 552 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 TAS2R14Q9NYV8 317 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ZMYND8Q9ULU4 1186 aaPredicted RBP7.55□□□□□ -1.2
PMPCB-207ENST00000469560 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
PMPCB-207ENST00000469560 ZC3H11AO75152 810 aaKnown RBP eCLIP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 PHACTR2O75167 634 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 DGKIO75912 1065 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 KIF4AO95239 1232 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TNNC2P02585 160 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TPM2P07951 284 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 FBXO45P0C2W1 286 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 SKIP12755 728 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 RAG1P15918 1043 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 ARHGAP25P42331 645 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 AARSP49588 968 aaKnown RBP eCLIP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 RAB27AP51159 221 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 YARSP54577 528 aaKnown RBP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 RAD23BP54727 409 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 GSDMDP57764 484 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 WDR5P61964 334 aaKnown RBP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 RBP5P82980 135 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 CDK17Q00537 523 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 NR1H3Q13133 447 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TRIM14Q14142 442 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 SGSM1Q2NKQ1 1148 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 ZNF699Q32M78 642 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 WDR72Q3MJ13 1102 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TIGD5Q53EQ6 642 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 FAM109BQ6ICB4 259 aaPredicted RBP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 ZNF365Q70YC5 407 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 OTOP2Q7RTS6 562 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 CNGA4Q8IV77 575 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 WDTC1Q8N5D0 677 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 SYN2Q92777 582 aaPredicted RBP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 TOP1MTQ969P6 601 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
PMPCB-207ENST00000469560 FTHL17Q9BXU8 183 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 PACSIN1Q9BY11 444 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 NIF3L1Q9GZT8 377 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 CWH43Q9H720 699 aa7.54□□□□□ -1.2
PMPCB-207ENST00000469560 ELAC1Q9H777 363 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms