RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 LTBP1Q14766 1721 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 A0A0G2JND7 137 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 IL1BP01584 269 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 KRT5P13647 590 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 ARSEP51690 589 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 RAP1GDS1P52306 607 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 BPIFB4P59827 614 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 SCYL3Q8IZE3 742 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 RBM41Q96IZ5 413 aaKnown RBP20.8■□□□□ 0.92
SDF4-205ENST00000465727 RIT2Q99578 217 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 FAM118BQ9BPY3 351 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 TSSK1BQ9BXA7 367 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 TAS2R1Q9NYW7 299 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 EXOC7Q9UPT5 735 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 ZNF148Q9UQR1 794 aa20.8■□□□□ 0.92
SDF4-205ENST00000465727 MAGEC1O60732 1142 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 ESRRAP11474 423 aaPredicted RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 GPS1Q13098 491 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 KLHL38Q2WGJ6 581 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 RNASEH2BQ5TBB1 312 aaKnown RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 ADGRD1Q6QNK2 874 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 MON1BQ7L1V2 547 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 CHSY1Q86X52 802 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 PHC3Q8NDX5 983 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 DHRS4Q9BTZ2 278 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.79■□□□□ 0.922e-7■■■■■ 52.5
SDF4-205ENST00000465727 DNAJB4Q9UDY4 337 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 POLIQ9UNA4 740 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 CYP1A1P04798 512 aaPredicted RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 RARBP10826 455 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 SSR1P43307 286 aaKnown RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 SH3BGRP55822 239 aaPredicted RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 TAS2R40P59535 323 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 ZBTB16Q05516 673 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 ENPEPQ07075 957 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 NFX1Q12986 1120 aaKnown RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 PPP1R2P3Q6NXS1 205 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 PCGF5Q86SE9 256 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 RCOR2Q8IZ40 523 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 ZSWIM2Q8NEG5 633 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 TCP10LQ8TDR4 215 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 DHX38Q92620 1227 aaKnown RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 AZIN2Q96A70 460 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 VCPIP1Q96JH7 1222 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 FHDC1Q9C0D6 1143 aaPredicted RBP20.79■□□□□ 0.92
SDF4-205ENST00000465727 PI4KBQ9UBF8 816 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 SLC4A7Q9Y6M7 1214 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 SCINQ9Y6U3 715 aa20.79■□□□□ 0.92
SDF4-205ENST00000465727 PDLIM1O00151 329 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 ONECUT3O60422 494 aaPredicted RBP20.78■□□□□ 0.92
SDF4-205ENST00000465727 MCL1Q07820 350 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 PDIA2Q13087 525 aaKnown RBP20.78■□□□□ 0.92
SDF4-205ENST00000465727 AOC3Q16853 763 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 TATDN1Q6P1N9 297 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 CBWD2Q8IUF1 395 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 PDCD7Q8N8D1 485 aaKnown RBP20.78■□□□□ 0.92
SDF4-205ENST00000465727 BANPQ8N9N5 519 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 ATP11CQ8NB49 1132 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 TAS1R2Q8TE23 839 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 TEKT1Q969V4 418 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 DNPEPQ9ULA0 475 aa20.78■□□□□ 0.92
SDF4-205ENST00000465727 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 CFBP00751 764 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 VIL1P09327 827 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 SERPINB3P29508 390 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 PSMC4P43686 418 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 CCDC174Q6PII3 467 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 TRIM72Q6ZMU5 477 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 ARHGAP22Q7Z5H3 698 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 SEPT12Q8IYM1 358 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 CERS5Q8N5B7 392 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 WDR60Q8WVS4 1066 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 CPA5Q8WXQ8 436 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 RANBP17Q9H2T7 1088 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 VCX3BQ9H321 246 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 PCDH9Q9HC56 1237 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 VCX3AQ9NNX9 186 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 KRT82Q9NSB4 513 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 IL1RAPL1Q9NZN1 696 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 RABGEF1Q9UJ41 708 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 SYNPO2Q9UMS6 1093 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 LRRC37AA6NMS7 1700 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 GOLGA8IPA6NC78 632 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 GOLGA8JA6NMD2 632 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 P4HBP07237 508 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 CD58P19256 250 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 NCKAP1LP55160 1127 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 NFIAQ12857 509 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 OVGP1Q12889 678 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 HIF1AQ16665 826 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 APOBEC3HQ6NTF7 200 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 RINLQ6ZS11 566 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 MZB1Q8WU39 189 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 NCSTNQ92542 709 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 CCDC127Q96BQ5 260 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 TMEM120AQ9BXJ8 343 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 METTL5Q9NRN9 209 aaKnown RBP20.77■□□□□ 0.92
SDF4-205ENST00000465727 PRR12Q9ULL5 1215 aa20.77■□□□□ 0.92
SDF4-205ENST00000465727 ZHX2Q9Y6X8 837 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms