RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 BLOC1S6Q9UL45 172 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 SLX4Q8IY92 1834 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 CFAP69A5D8W1 941 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 KRT36O76013 467 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 WFS1O76024 890 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 LUC7L3O95232 432 aaKnown RBP14.9□□□□□ -0.02
MCF2L-218ENST00000442625 MAPTP10636 758 aaKnown RBP14.9□□□□□ -0.02
MCF2L-218ENST00000442625 GNAT1P11488 350 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 KRT4P19013 534 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 NCKAP1LP55160 1127 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 GPS1Q13098 491 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 MUM1Q2TAK8 710 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 TBC1D25Q3MII6 688 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 NRG4Q8WWG1 115 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 DNAJC9Q8WXX5 260 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 ZNF75CPQ92670 426 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-218ENST00000442625 GRAMD1AQ96CP6 724 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 SMC6Q96SB8 1091 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 FAM213AQ9BRX8 229 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 ZNF148Q9UQR1 794 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 UTRNP46939 3433 aa14.9□□□□□ -0.02
MCF2L-218ENST00000442625 IFNB1P01574 187 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 UNGP13051 313 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 ATP6V1C1P21283 382 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 KLRC2P26717 231 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 CHRNA5P30532 468 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 DSG3P32926 999 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 PDCD2Q16342 344 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 SCARA3Q6AZY7 606 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 TMEM39BQ9GZU3 492 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 FBXO6Q9NRD1 293 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 ARL8BQ9NVJ2 186 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 NMRK1Q9NWW6 199 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 TCEAL9Q9UHQ7 104 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 HERC5Q9UII4 1024 aaKnown RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 ZNF536O15090 1300 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 UMODL1Q5DID0 1318 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 YDJCA8MPS7 323 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 CCNE2O96020 404 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 YY1P25490 414 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 HSD17B4P51659 736 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 ARSEP51690 589 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 PDK4Q16654 411 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 SYCP2LQ5T4T6 812 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 OGFOD1Q8N543 542 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 CCDC89Q8N998 374 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 CADM1Q9BY67 442 aaKnown RBP14.89□□□□□ -0.03
MCF2L-218ENST00000442625 PPP1R12CQ9BZL4 782 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 SLC17A7Q9P2U7 560 aa14.89□□□□□ -0.03
MCF2L-218ENST00000442625 ZBED4O75132 1171 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 SSTR1P30872 391 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 SP4Q02446 784 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 DMP1Q13316 513 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 KPNB1Q14974 876 aaKnown RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 RCN1Q15293 331 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 TXNRD3NBQ6F5E7 133 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 MYLK4Q86YV6 388 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 NLGN1Q8N2Q7 840 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 PTPRN2Q92932 1015 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 TAAR1Q96RJ0 339 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 SLX1AQ9BQ83 275 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 RAVER2Q9HCJ3 691 aaKnown RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 KMT5AQ9NQR1 393 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 COQ4Q9Y3A0 265 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 PCNTO95613 3336 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 MYPNQ86TC9 1320 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 LTBP4Q8N2S1 1624 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 HNRNPDLO14979 420 aaKnown RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 ALDH3A1P30838 453 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CAP2P40123 477 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CPA2P48052 419 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 RPS6KA3P51812 740 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 WNT7BP56706 349 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CYP24A1Q07973 514 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CCDC6Q16204 474 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CLNKQ7Z7G1 428 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 LRRC6Q86X45 466 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 ZCCHC9Q8N567 271 aaKnown RBP14.88□□□□□ -0.03
MCF2L-218ENST00000442625 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 TSC22D3Q99576 134 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 TMOD2Q9NZR1 351 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 TELO2Q9Y4R8 837 aa14.88□□□□□ -0.03
MCF2L-218ENST00000442625 MAGEB2O15479 319 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 DCTN3O75935 186 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 NSFP46459 744 aaKnown RBP14.87□□□□□ -0.03
MCF2L-218ENST00000442625 RPL7AP62424 266 aaKnown RBP14.87□□□□□ -0.03
MCF2L-218ENST00000442625 CAV1Q03135 178 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 PDIA2Q13087 525 aaKnown RBP14.87□□□□□ -0.03
MCF2L-218ENST00000442625 CCNG2Q16589 344 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 ANO5Q75V66 913 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 TTC7BQ86TV6 843 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 MAP4K3Q8IVH8 894 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 WDR60Q8WVS4 1066 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 TEKT4Q8WW24 435 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 ZNF516Q92618 1163 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 BICD1Q96G01 975 aa14.87□□□□□ -0.03
MCF2L-218ENST00000442625 TMEM121Q9BTD3 319 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms