RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 FAM193AP78312 1265 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 CBX1P83916 185 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 BEX3Q00994 111 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 TMEM62Q0P6H9 643 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 NOGQ13253 232 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 SND1Q7KZF4 910 aaKnown RBP eCLIP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 SLC13A5Q86YT5 568 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 MREGQ8N565 214 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 C12orf50Q8NA57 414 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 IPO4Q8TEX9 1081 aaKnown RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 DNAJB3Q8WWF6 145 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 BTBD6Q96KE9 485 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 EPB41L5Q9HCM4 733 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 FAM114A2Q9NRY5 505 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 HPCAL4Q9UM19 191 aa13.98□□□□□ -0.17
CPSF4-206ENST00000441580 BARX2Q9UMQ3 279 aaPredicted RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 UTP11Q9Y3A2 253 aaKnown RBP13.98□□□□□ -0.17
CPSF4-206ENST00000441580 FAM170AA1A519 330 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 SEPT4O43236 478 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 TREHO43280 583 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CAPN15O75808 1086 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 RECQL4O94761 1208 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CD4P01730 458 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 HMGCRP04035 888 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 GLI1P08151 1106 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 RARBP10826 455 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 FGFR4P22455 802 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 OAS2P29728 719 aaKnown RBP13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CETN2P41208 172 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 PNPLA4P41247 253 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 PSMC4P43686 418 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 RAD23BP54727 409 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 MRPS6P82932 125 aaKnown RBP13.97□□□□□ -0.17
CPSF4-206ENST00000441580 DR1Q01658 176 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CYP1B1Q16678 543 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 ZNF394Q53GI3 561 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 ERICH1Q86X53 443 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 KATNAL2Q8IYT4 538 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 HACE1Q8IYU2 909 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 GOLGA6L1Q8N7Z2 621 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 NIPA2Q8N8Q9 360 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 FAM71BQ8TC56 605 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CASKIN2Q8WXE0 1202 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 SEC14L1Q92503 715 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 TRIB2Q92519 343 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 TMEM176AQ96HP8 235 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 FAM129AQ9BZQ8 928 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CHORDC1Q9UHD1 332 aaPredicted RBP13.97□□□□□ -0.17
CPSF4-206ENST00000441580 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.97□□□□□ -0.17
CPSF4-206ENST00000441580 TRPV2Q9Y5S1 764 aa13.97□□□□□ -0.17
CPSF4-206ENST00000441580 CFHP08603 1231 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 ITGA4P13612 1032 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 CYP3A5P20815 502 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 SGO2Q562F6 1265 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 LRRC38Q5VT99 294 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 PAXIP1Q6ZW49 1069 aaPredicted RBP13.96□□□□□ -0.17
CPSF4-206ENST00000441580 SESTD1Q86VW0 696 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 SLC4A11Q8NBS3 891 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 TRPV1Q8NER1 839 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 FNIP1Q8TF40 1166 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 TFAP2BQ92481 460 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
CPSF4-206ENST00000441580 RUFY1Q96T51 708 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 NT5C1AQ9BXI3 368 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 EIF2AQ9BY44 585 aaKnown RBP13.96□□□□□ -0.17
CPSF4-206ENST00000441580 ELOVL4Q9GZR5 314 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 NXF3Q9H4D5 531 aaKnown RBP13.96□□□□□ -0.17
CPSF4-206ENST00000441580 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
CPSF4-206ENST00000441580 PCYOX1Q9UHG3 505 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 GTF2IRD1Q9UHL9 959 aa13.96□□□□□ -0.17
CPSF4-206ENST00000441580 TCRBV5S1A1TA0A578 114 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 GOLGA6BA6NDN3 693 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 M0QYV0 167 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 O00370 1275 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 KCNE1P15382 129 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 CST5P28325 142 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-206ENST00000441580 CTGFP29279 349 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 PIGHQ14442 188 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-206ENST00000441580 HIC1Q14526 733 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 HLTFQ14527 1009 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF4-206ENST00000441580 SCARA3Q6AZY7 606 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 DCUN1D2Q6PH85 259 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
CPSF4-206ENST00000441580 PKNOX2Q96KN3 472 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 MCEEQ96PE7 176 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 CELF4Q9BZC1 486 aaKnown RBP13.95□□□□□ -0.18
CPSF4-206ENST00000441580 HOMER3Q9NSC5 361 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 PARP2Q9UGN5 583 aa13.95□□□□□ -0.18
CPSF4-206ENST00000441580 AMACRQ9UHK6 382 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms