RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ETNPPLQ8TBG4 499 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 CD101Q93033 1021 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 SLC46A2Q9BY10 475 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 TASP1Q9H6P5 420 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 TOR4AQ9NXH8 423 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 RGL1Q9NZL6 768 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 DNMT3LQ9UJW3 386 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 TBX20Q9UMR3 447 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
LSG1-202ENST00000427461 RBM8AQ9Y5S9 174 aaKnown RBP10.08□□□□□ -0.8
LSG1-202ENST00000427461 ZNF638Q14966 1978 aaKnown RBP10.08□□□□□ -0.8
LSG1-202ENST00000427461 GOLGA8CPA6NN73 597 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 RIOK3O14730 519 aaKnown RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 SYN3O14994 580 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 CBFA2T3O75081 653 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 EDN1P05305 212 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 P4HBP07237 508 aaKnown RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 ATXN1LP0C7T5 689 aaKnown RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 CDR1P51861 262 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 EPHB3P54753 998 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 CTTNQ14247 550 aaKnown RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 CRY1Q16526 586 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 MAP7D1Q3KQU3 841 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 ARHGAP15Q53QZ3 475 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 ZNF280DQ6N043 979 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 TTC9BQ8N6N2 239 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 TBCKQ8TEA7 893 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 USP33Q8TEY7 942 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 UROC1Q96N76 676 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 LXNQ9BS40 222 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 NFKBIZQ9BYH8 718 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 SEMA4CQ9C0C4 833 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 SLKQ9H2G2 1235 aaPredicted RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 KIAA1522Q9P206 1035 aaPredicted RBP10.07□□□□□ -0.8
LSG1-202ENST00000427461 VAV3Q9UKW4 847 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 PTPRQQ9UMZ3 2332 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 PLXND1Q9Y4D7 1925 aa10.07□□□□□ -0.8
LSG1-202ENST00000427461 PTPN13Q12923 2485 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 LRRIQ4A6NIV6 560 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 PODXLO00592 558 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 ZBTB43O43298 467 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 TLX3O43711 291 aaPredicted RBP10.06□□□□□ -0.8
LSG1-202ENST00000427461 WISP1O95388 367 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 GNA11P29992 359 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 WEE1P30291 646 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 ADD1P35611 737 aaKnown RBP10.06□□□□□ -0.8
LSG1-202ENST00000427461 AMPD2Q01433 879 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 CYP4A11Q02928 519 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 TMEM132AQ24JP5 1023 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 OTUD6AQ7L8S5 288 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 GLRX5Q86SX6 157 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 C4orf19Q8IY42 314 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 TMEM130Q8N3G9 435 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 BEST2Q8NFU1 509 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 CEP76Q8TAP6 659 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 DDX12PQ92771 950 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 PSMG2Q969U7 264 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 DYDC2Q96IM9 177 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 SPACA7Q96KW9 195 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 ARID3AQ99856 593 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 IL21Q9HBE4 155 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 PCOLCE2Q9UKZ9 415 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 MMP17Q9ULZ9 603 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 TEX15Q9BXT5 2789 aa10.06□□□□□ -0.8
LSG1-202ENST00000427461 SMIM28A0A1B0GU29 152 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 GOLGA8AA7E2F4 631 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 GOLGA8BA8MQT2 603 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 K7EQS6 105 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 N4BP3O15049 544 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 SLC37A4O43826 429 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 DKC1O60832 514 aaKnown RBP eCLIP10.05□□□□□ -0.8
LSG1-202ENST00000427461 KRT10P13645 584 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 LIG1P18858 919 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 HOXD12P35452 270 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 ALDH1A3P47895 512 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 SLC14A1Q13336 389 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 PLD1Q13393 1074 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 HDAC1Q13547 482 aaPredicted RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 MAEAQ7L5Y9 396 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 GPR155Q7Z3F1 870 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 SFTPA1Q8IWL2 248 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 CMTM8Q8IZV2 173 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 ATAD1Q8NBU5 361 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 SETD7Q8WTS6 366 aaKnown RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 USP13Q92995 863 aaPredicted RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 TBC1D32Q96NH3 1257 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 PNMA5Q96PV4 448 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 POLR3FQ9H1D9 316 aaPredicted RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 FZD8Q9H461 694 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 ZDHHC4Q9NPG8 344 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 GPRC5CQ9NQ84 441 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 PRMT7Q9NVM4 692 aaPredicted RBP10.05□□□□□ -0.8
LSG1-202ENST00000427461 MAFFQ9ULX9 164 aa10.05□□□□□ -0.8
LSG1-202ENST00000427461 NUB1Q9Y5A7 615 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms