RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 SLC17A7Q9P2U7 560 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 RABGEF1Q9UJ41 708 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 PRR12Q9ULL5 1215 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 CLUHO75153 1309 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 NFASCO94856 1347 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 GDF11O95390 407 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 GEMIN4P57678 1058 aaKnown RBP13.39□□□□□ -0.27
CTCFL-204ENST00000422869 MORF4L2Q15014 288 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 WDR72Q3MJ13 1102 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 SCYL3Q8IZE3 742 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 MCUR1Q96AQ8 359 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 PI4K2AQ9BTU6 479 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 MMADHCQ9H3L0 296 aaPredicted RBP13.39□□□□□ -0.27
CTCFL-204ENST00000422869 MANSC1Q9H8J5 431 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 ZNF212Q9UDV6 495 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
CTCFL-204ENST00000422869 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 PDIA2Q13087 525 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 EAPPQ56P03 285 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ZC3H12AQ5D1E8 599 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 LRRC6Q86X45 466 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ANKMY2Q8IV38 441 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 AZIN2Q96A70 460 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TRIM55Q9BYV6 548 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ARHGEF4Q9NR80 690 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ZNF148Q9UQR1 794 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 BTAF1O14981 1849 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TTC36A6NLP5 189 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 SLC16A4O15374 487 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 RARBP10826 455 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 AMPD1P23109 780 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 NEK3P51956 506 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 JAG1P78504 1218 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 CDK16Q00536 496 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ATP13A4Q4VNC1 1196 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 KAZNQ674X7 775 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TATDN1Q6P1N9 297 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 SH3BP5LQ7L8J4 393 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TTC7BQ86TV6 843 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 VPS52Q8N1B4 723 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 BANPQ8N9N5 519 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 STMN2Q93045 179 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TRIM11Q96F44 468 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 BICD1Q96G01 975 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 FAM84AQ96KN4 292 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 EPAS1Q99814 870 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 SH2D3AQ9BRG2 576 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TMEM120AQ9BXJ8 343 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 VPS11Q9H270 941 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DDX43Q9NXZ2 648 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 C2orf71A6NGG8 1288 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 PI4K2BG5E9Z4 385 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 GOLGA8RI6L899 631 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 MAP3K7O43318 606 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 CYP1A1P04798 512 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 CFHP08603 1231 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DLDP09622 509 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TCF4P15884 667 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 GLRA2P23416 452 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 RARRES1P49788 294 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ARFIP2P53365 341 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 THOC5Q13769 683 aaKnown RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TFDP1Q14186 410 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DRICH1Q6PGQ1 229 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 NLRX1Q86UT6 975 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DRAXINQ8NBI3 349 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
CTCFL-204ENST00000422869 DHRS4Q9BTZ2 278 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 ST6GALNAC4Q9H4F1 302 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 KCNQ5Q9NR82 932 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 PCDHAC2Q9Y5I4 1007 aa13.38□□□□□ -0.27
CTCFL-204ENST00000422869 MYH9P35579 1960 aaKnown RBP13.37□□□□□ -0.27
CTCFL-204ENST00000422869 TM9SF1O15321 606 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 VIL1P09327 827 aaKnown RBP13.37□□□□□ -0.27
CTCFL-204ENST00000422869 DSG3P32926 999 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 SERPINB4P48594 390 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 GCNT1Q02742 428 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 GAD2Q05329 585 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 MAMLD1Q13495 774 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 ADGRD1Q6QNK2 874 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 CENPUQ71F23 418 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 SV2AQ7L0J3 742 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 PPFIBP2Q8ND30 876 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
CTCFL-204ENST00000422869 TSSK1BQ9BXA7 367 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms