RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FPR1P21462 350 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ADCY2Q08462 1091 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 VPS53Q5VIR6 699 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 RSPO2Q6UXX9 243 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 TMC5Q6UXY8 1006 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 CTU1Q7Z7A3 348 aaKnown RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 PPP1R3BQ86XI6 285 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 LINC00116Q8NCU8 138 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TMEM52Q8NDY8 209 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 HDAC10Q969S8 669 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 MEGF10Q96KG7 1140 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TTYH1Q9H313 450 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 ACSS2Q9NR19 701 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 RXFP3Q9NSD7 469 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ATP8A2Q9NTI2 1148 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 NCDNQ9UBB6 729 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 EBF1Q9UH73 591 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 SCOCQ9UIL1 159 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 A0A087WZ62 844 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 VPS4BO75351 444 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 RPS6KA4O75676 772 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 CSTBP04080 98 aaKnown RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 KRT1P04264 644 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 MMP10P09238 476 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 HSPA7P48741 367 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 SMCPP49901 116 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 NOMO3P69849 1222 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 PRKG2Q13237 762 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 CUL4BQ13620 913 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 PRICKLE4Q2TBC4 344 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 RALGPS1Q5JS13 557 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ITPRIPL1Q6GPH6 555 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 HHIPL2Q6UWX4 724 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 RASGRP2Q7LDG7 609 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FBXO11Q86XK2 927 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 C2CD5Q86YS7 1000 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 WDR48Q8TAF3 677 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 MTFMTQ96DP5 389 aaKnown RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 PHACTR3Q96KR7 559 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 CAPNS2Q96L46 248 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TSGA13Q96PP4 275 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FDXACB1Q9BRP7 624 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 NUP62CLQ9H1M0 184 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ADAMTS10Q9H324 1103 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 EPB41L1Q9H4G0 881 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 UBN1Q9NPG3 1134 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 KRT84Q9NSB2 600 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FFAR2O15552 330 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 SKAP2O75563 359 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 TMF1P82094 1093 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ZNF543Q08ER8 600 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 NEXNQ0ZGT2 675 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FAPQ12884 760 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 FAM205BPQ63HN1 556 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 PAOXQ6QHF9 649 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 UNC13DQ70J99 1090 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 OTOP2Q7RTS6 562 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 ADGRA1Q86SQ6 560 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TTC30AQ86WT1 665 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 WFDC3Q8IUB2 231 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 CDHR1Q96JP9 859 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 MYOCQ99972 504 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 TREX2Q9BQ50 279 aaPredicted RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 NUDT16L1Q9BRJ7 211 aaKnown RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 VPS33BQ9H267 617 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 SLAMF8Q9P0V8 285 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 PRSS50Q9UI38 385 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 SLC39A10Q9ULF5 831 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 B3GALT1Q9Y5Z6 326 aa2.91□□□□□ -1.94
MCF2-204ENST00000414978 USP42Q9H9J4 1324 aaKnown RBP2.91□□□□□ -1.94
MCF2-204ENST00000414978 H0Y858 1186 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 FGF18O76093 207 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 FGFR4P22455 802 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 NOS3P29474 1203 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 CCT5P48643 541 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 PRKAA2P54646 552 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 FMO1Q01740 532 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 CACNB2Q08289 660 aaPredicted RBP2.9□□□□□ -1.94
MCF2-204ENST00000414978 PPFIA1Q13136 1202 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 BLMHQ13867 455 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 TTC38Q5R3I4 469 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 RCSD1Q6JBY9 416 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 GADL1Q6ZQY3 521 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 SESTD1Q86VW0 696 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 TSPYL5Q86VY4 417 aaPredicted RBP2.9□□□□□ -1.94
MCF2-204ENST00000414978 PHYKPLQ8IUZ5 450 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 SYTL4Q96C24 671 aaPredicted RBP2.9□□□□□ -1.94
MCF2-204ENST00000414978 HEPHQ9BQS7 1158 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 LMAN2LQ9H0V9 348 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 CNTD2Q9H8S5 307 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 MKNK2Q9HBH9 465 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 TLR9Q9NR96 1032 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 NKIRAS2Q9NYR9 191 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 AASSQ9UDR5 926 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 MTF2Q9Y483 593 aaPredicted RBP2.9□□□□□ -1.94
MCF2-204ENST00000414978 CAPN6Q9Y6Q1 641 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 SYNRGQ9UMZ2 1314 aa2.9□□□□□ -1.94
MCF2-204ENST00000414978 ACOT7O00154 380 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 SNAP23O00161 211 aa2.9□□□□□ -1.95
MCF2-204ENST00000414978 RAB27BO00194 218 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms